Daniel O. Stram

Daniel O. Stram

University of Southern California

H-index: 115

North America-United States

Daniel O. Stram Information

University

University of Southern California

Position

Professor Biostatistics Division

Citations(all)

51354

Citations(since 2020)

15745

Cited By

42635

hIndex(all)

115

hIndex(since 2020)

58

i10Index(all)

382

i10Index(since 2020)

255

Email

University Profile Page

University of Southern California

Daniel O. Stram Skills & Research Interests

Biostatistics

Genetics

Radiation Epidemiology

Clinical Trials

Top articles of Daniel O. Stram

Association between Airport Ultrafine Particles and Lung Cancer Risk: The Multiethnic Cohort Study

Authors

Arthur Bookstein,Justine Po,Chiuchen Tseng,Timothy V Larson,Juan Yang,Sung-shim L Park,Jun Wu,Salma Shariff-Marco,Pushkar P Inamdar,Ugonna Ihenacho,Veronica W Setiawan,Mindy C DeRouen,Loïc Le Marchand,Daniel O Stram,Jonathan Samet,Beate Ritz,Scott Fruin,Anna H Wu,Iona Cheng

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2024/3/13

Background Ultrafine particles (UFP) are unregulated air pollutants abundant in aviation exhaust. Emerging evidence suggests that UFPs may impact lung health due to their high surface area-to-mass ratio and deep penetration into airways. This study aimed to assess long-term exposure to airport-related UFPs and lung cancer incidence in a multiethnic population in Los Angeles County. Methods Within the California Multiethnic Cohort, we examined the association between long-term exposure to airport-related UFPs and lung cancer incidence. Multivariable Cox proportional hazards regression models were used to estimate the effect of UFP exposure on lung cancer incidence. Subgroup analyses by demographics, histology and smoking status were conducted. Results Airport-related UFP exposure was not associated with lung cancer risk [per one IGR …

Excess pancreatic cancer risk due to smoking and modifying effect of quitting smoking: The Multiethnic Cohort Study

Authors

David Bogumil,Daniel Stram,Dale L Preston,Stephen J Pandol,Anna H Wu,Roberta McKean-Cowdin,David V Conti,Veronica Wendy Setiawan

Journal

Cancer Causes & Control

Published Date

2024/3

PurposeRisk factors for pancreatic cancer include racial/ethnic disparities and smoking. However, risk trajectories by smoking history and race/ethnicity are unknown. We examined the association of smoking with pancreatic cancer by race/ethnicity to generate age-specific incidence estimates by smoking history.MethodsWe modeled pancreatic cancer incidence by race/ethnicity, age, pack-years, and years-quit using an excess relative risk model for 182,011 Multiethnic Cohort participants. We tested heterogeneity of smoking variables and pancreatic cancer by race/ethnicity and predicted incidence by smoking history.ResultsWe identified 1,831 incident pancreatic cancer cases over an average 19.3 years of follow-up. Associations of pack-years (p interaction by race/ethnicity = 0.41) and years-quit (p interaction = 0.83) with pancreatic cancer did not differ by race/ethnicity. Fifty pack-years smoked was …

Association of Urinary N7-(1-hydroxyl-3-buten-1-yl) Guanine (EB-GII) Adducts and Butadiene-Mercapturic Acids with Lung Cancer Development in Cigarette Smokers

Authors

Caitlin C Jokipii Krueger,Sungshim L Park,Yesha Patel,Daniel O Stram,Melinda Aldrich,Qiuyin Cai,Natalia Y Tretyakova

Journal

Chemical Research in Toxicology

Published Date

2024/2/5

Approximately 10% of smokers will develop lung cancer. Sensitive predictive biomarkers are needed to identify susceptible individuals. 1,3-Butadiene (BD) is among the most abundant tobacco smoke carcinogens. BD is metabolically activated to 3,4-epoxy-1-butene (EB), which is detoxified via the glutathione conjugation/mercapturic acid pathway to form monohydroxybutenyl mercapturic acid (MHBMA) and dihydroxybutyl mercapturic acid (DHBMA). Alternatively, EB can react with guanine nucleobases of DNA to form N7-(1-hydroxyl-3-buten-1-yl) guanine (EB-GII) adducts. We employed isotope dilution LC/ESI-HRMS/MS methodologies to quantify MHBMA, DHBMA, and EB-GII in urine of smokers who developed lung cancer (N = 260) and matched smoking controls (N = 259) from the Southern Community Cohort (white and African American). The concentrations of all three biomarkers were significantly higher in …

Epigenome-wide association study of total nicotine equivalents in multiethnic current smokers from three prospective cohorts

Authors

Brian Z Huang,Alexandra M Binder,Brandon Quon,Yesha M Patel,Annette Lum-Jones,Maarit Tiirikainen,Sharon E Murphy,Lenora Loo,Alika K Maunakea,Christopher A Haiman,Lynne R Wilkens,Woon-Puay Koh,Qiuyin Cai,Melinda C Aldrich,Kimberly D Siegmund,Stephen S Hecht,Jian-Min Yuan,William J Blot,Daniel O Stram,Loïc Le Marchand,Sungshim L Park

Journal

The American Journal of Human Genetics

Published Date

2024/2/12

The impact of tobacco exposure on health varies by race and ethnicity and is closely tied to internal nicotine dose, a marker of carcinogen uptake. DNA methylation is strongly responsive to smoking status and may mediate health effects, but study of associations with internal dose is limited. We performed a blood leukocyte epigenome-wide association study (EWAS) of urinary total nicotine equivalents (TNEs; a measure of nicotine uptake) and DNA methylation measured using the MethylationEPIC v1.0 BeadChip (EPIC) in six racial and ethnic groups across three cohort studies. In the Multiethnic Cohort Study (discovery, n = 1994), TNEs were associated with differential methylation at 408 CpG sites across >250 genomic regions (p < 9 × 10−8). The top significant sites were annotated to AHRR, F2RL3, RARA, GPR15, PRSS23, and 2q37.1, all of which had decreasing methylation with increasing TNEs. We identified …

Novel breast cancer susceptibility loci under linkage peaks identified in African ancestry consortia

Authors

Heather M Ochs-Balcom,Leah Preus,Zhaohui Du,Robert C Elston,Craig C Teerlink,Guochong Jia,Xingyi Guo,Qiuyin Cai,Jirong Long,Jie Ping,Bingshan Li,Daniel O Stram,Xiao-Ou Shu,Maureen Sanderson,Guimin Gao,Thomas Ahearn,Kathryn L Lunetta,Gary Zirpoli,Melissa A Troester,Edward A Ruiz-Narváez,Stephen A Haddad,Jonine Figueroa,Esther M John,Leslie Bernstein,Jennifer J Hu,Regina G Ziegler,Sarah Nyante,Elisa V Bandera,Sue A Ingles,Nicholas Mancuso,Michael F Press,Sandra L Deming,Jorge L Rodriguez-Gil,Song Yao,Temidayo O Ogundiran,Oladosu Ojengbede,Manjeet K Bolla,Joe Dennis,Alison M Dunning,Douglas F Easton,Kyriaki Michailidou,Paul DP Pharoah,Dale P Sandler,Jack A Taylor,Qin Wang,Katie M O’Brien,Clarice R Weinberg,Cari M Kitahara,William Blot,Katherine L Nathanson,Anselm Hennis,Barbara Nemesure,Stefan Ambs,Lara E Sucheston-Campbell,Jeannette T Bensen,Stephen J Chanock,Andrew F Olshan,Christine B Ambrosone,Olufunmilayo I Olopade,Ghana Breast Health Study Team,David V Conti,Julie Palmer,Montserrat García-Closas,Dezheng Huo,Wei Zheng,Christopher Haiman

Journal

Human molecular genetics

Published Date

2024/1/23

Background Expansion of genome-wide association studies across population groups is needed to improve our understanding of shared and unique genetic contributions to breast cancer. We performed association and replication studies guided by a priori linkage findings from African ancestry (AA) relative pairs. Methods We performed fixed-effect inverse-variance weighted meta-analysis under three significant AA breast cancer linkage peaks (3q26-27, 12q22-23, and 16q21-22) in 9241 AA cases and 10 193 AA controls. We examined associations with overall breast cancer as well as estrogen receptor (ER)-positive and negative subtypes (193,132 SNPs). We replicated associations in the African-ancestry Breast Cancer Genetic Consortium (AABCG). Results In AA women, we identified two associations on chr12q for overall breast cancer (rs1420647 …

Exposure to outdoor ambient air toxics and risk of breast cancer: The multiethnic cohort

Authors

Julia E Heck,Di He,Sam E Wing,Beate Ritz,Chandra D Carey,Juan Yang,Daniel O Stram,Loïc Le Marchand,Sungshim Lani Park,Iona Cheng,Anna H Wu

Journal

International Journal of Hygiene and Environmental Health

Published Date

2024/6/1

BackgroundA growing literature has reported associations between traffic-related air pollution and breast cancer, however there are fewer investigations into specific ambient agents and any putative risk of breast cancer development, particularly studies occurring in populations residing in higher pollution areas such as Los Angeles.ObjectivesTo estimate breast cancer risks related to ambient air toxics exposure at residential addresses.MethodsWe examined the relationships between ambient air toxics and breast cancer risk in the Multiethnic Cohort among 48,665 California female participants followed for cancer from 2003 through 2013. We obtained exposure data on chemicals acting as endocrine disruptors or mammary gland carcinogens from the National-Scale Air Toxics Assessment. Cox proportional hazards models were used to estimate breast cancer risk per one interquartile range (IQR) increase in air …

Genome-wide association study of abdominal MRI-measured visceral fat: The multiethnic cohort adiposity phenotype study

Authors

Samantha A Streicher,Unhee Lim,S Lani Park,Yuqing Li,Xin Sheng,Victor Hom,Lucy Xia,Loreall Pooler,John Shepherd,Lenora WM Loo,Thomas Ernst,Steven Buchthal,Adrian A Franke,Maarit Tiirikainen,Lynne R Wilkens,Christopher A Haiman,Daniel O Stram,Iona Cheng,Loïc Le Marchand

Journal

Plos one

Published Date

2023/1/6

Few studies have explored the genetic underpinnings of intra-abdominal visceral fat deposition, which varies substantially by sex and race/ethnicity. Among 1,787 participants in the Multiethnic Cohort (MEC)-Adiposity Phenotype Study (MEC-APS), we conducted a genome-wide association study (GWAS) of the percent visceral adiposity tissue (VAT) area out of the overall abdominal area, averaged across L1-L5 (%VAT), measured by abdominal magnetic resonance imaging (MRI). A genome-wide significant signal was found on chromosome 2q14.3 in the sex-combined GWAS (lead variant rs79837492: Beta per effect allele = -4.76; P = 2.62 × 10−8) and in the male-only GWAS (lead variant rs2968545: (Beta = -6.50; P = 1.09 × 10−9), and one suggestive variant was found at 13q12.11 in the female-only GWAS (rs79926925: Beta = 6.95; P = 8.15 × 10−8). The negatively associated variants were most common in European Americans (T allele of rs79837492; 5%) and African Americans (C allele of rs2968545; 5%) and not observed in Japanese Americans, whereas the positively associated variant was most common in Japanese Americans (C allele of rs79926925, 5%), which was all consistent with the racial/ethnic %VAT differences. In a validation step among UK Biobank participants (N = 23,699 of mainly British and Irish ancestry) with MRI-based VAT volume, both rs79837492 (Beta = -0.026, P = 0.019) and rs2968545 (Beta = -0.028, P = 0.010) were significantly associated in men only (n = 11,524). In the MEC-APS, the association between rs79926925 and plasma sex hormone binding globulin levels reached statistical significance in females …

Excess risk due to smoking and modifying effect of quitting on bladder cancer incidence: the multiethnic cohort

Authors

David Bogumil,Victoria Cortessis,Daniel Stram,Veronica W Setiawan,Christopher Haiman,Loic Le Marchand,Gertraud Maskarinec

Journal

Cancer Research

Published Date

2023/4/4

Background: Smoking is an established risk factor for urothelial cancer of the bladder (BC), attributed to over 50% of cases among men, however associations outside of European-descent populations are infrequently reported. Further, absolute risk of BC by smoking history has not yet been reported. Characterizing these associations will identify value of smoking cessation across non-European ancestry populations. Methods: We estimated the association between pack-years, years quit, and BC among 181,231 Multiethnic Cohort Study participants from five major racial/ethnic groups (African Americans [AA], European Americans [EA], Japanese Americans [JA], Latinos [LA], Native Hawaiians [NH]) 45-75 years old at enrollment (1993-1996). Smoking history was assessed by self-report at cohort entry and on a follow-up survey (2003-2008). Associations were estimated using an excess relative risk model to …

Second Primary Lung Cancer Among Lung Cancer Survivors Who Never Smoked

Authors

Eunji Choi,Chloe C Su,Julie T Wu,Jacqueline V Aredo,Joel W Neal,Ann N Leung,Leah M Backhus,Natalie S Lui,Loïc Le Marchand,Daniel O Stram,Su-Ying Liang,Iona Cheng,Heather A Wakelee,Summer S Han

Journal

JAMA Network Open

Published Date

2023/11/1

ImportanceLung cancer among never-smokers accounts for 25% of all lung cancers in the US; recent therapeutic advances have improved survival among patients with initial primary lung cancer (IPLC), who are now at high risk of developing second primary lung cancer (SPLC). As smoking rates continue to decline in the US, it is critical to examine more closely the epidemiology of lung cancer among patients who never smoked, including their risk for SPLC.ObjectiveTo estimate and compare the cumulative SPLC incidence among lung cancer survivors who have never smoked vs those who have ever smoked.Design, Setting, and ParticipantsThis population-based prospective cohort study used data from the Multiethnic Cohort Study (MEC), which enrolled participants between April 18, 1993, and December 31, 1996, with follow-up through July 1, 2017. Eligible individuals for this study were aged 45 to 75 years …

Abstract C102: Interactions of a polygenic risk score and modifiable lifestyle factors for breast cancer in the Multiethnic Cohort

Authors

Alisha Chou,Fei Chen,Peggy Wan,Xin Sheng,Song-Yi Park,Daniel O Stram,Lynne R Wilkens,Loic Le Marchand,Christopher A Haiman

Published Date

2023/1/1

Purpose: A polygenic risk score (PRS) has demonstrated great potential in stratifying breast cancer risk in non-African ancestry populations. Several modifiable lifestyle risk factors have been identified for breast cancer, although little is known regarding their effects among women with varying genetic risk. Methods: In the Multiethnic Cohort (MEC), we conducted a nested case-control study of 3,229 breast cancer cases and 3,921 controls from five major racial/ethnic groups (White, African American, Latino, Japanese American, and Native Hawaiian). We examined a PRS of 313 variants in association with breast cancer risk and evaluated the interaction with selected modifiable lifestyle factors on the risk of breast cancer. The modifiable lifestyle factors examined included body mass index (BMI), physical activity, smoking, alcohol consumption, and five diet quality indexes, such as the Healthy Eating Index (HEI)-2010 …

Associations of a breast cancer polygenic risk score with tumor characteristics and survival

Authors

Josephine Lopes Cardozo,Irene L Andrulis,Stig E Bojesen,Thilo Dörk,Diana M Eccles,Peter A Fasching,Maartje J Hooning,Renske Keeman,Heli Nevanlinna,Emiel JT Rutgers,Douglas F Easton,Per Hall,Paul DP Pharoah,Laura J Van't Veer,Marjanka K Schmidt,Thomas U Ahearn,Hoda Anton-Culver,Volker Arndt,Paul L Auer,Annelie Augustinsson,Laura E Beane Freeman,Heiko Becher,Matthias W Beckmann,Sabine Behrens,Javier Benitez,Marina Bermisheva,Carl Blomqvist,Manjeet K Bolla,Bernardo Bonanni,Terry Boyle,Hermann Brenner,Sara Y Brucker,Thomas Brüning,Barbara Burwinkel,Saundra S Buys,Nicola J Camp,Federico Canzian,Fatima Cardoso,Jose E Castelao,Melissa H Cessna,Tsun L Chan,Jenny Chang-Claude,Georgia Chenevix-Trench,Ji-Yeob Choi,Sarah V Colonna,Ellen Copson,Fergus J Couch,Angela Cox,Simon S Cross,Kamila Czene,Mary B Daly,Joe Dennis,Peter Devilee,Caroline A Drukker,Alison M Dunning,Miriam Dwek,A Heather Eliassen,Christoph Engel,D Gareth Evans,Jonine D Figueroa,Olivia Fletcher,Henrik Flyger,Manuela Gago-Dominguez,Montserrat García-Closas,José A García-Sáenz,Jeanine Genkinger,Graham G Giles,Anna González-Neira,Pascal Guénel,Melanie Gündert,Eric Hahnen,Christopher A Haiman,Niclas Håkansson,Ute Hamann,Mikael Hartman,Bernadette AM Heemskerk-Gerritsen,Alexander Hein,Weang-Kee Ho,Reiner Hoppe,John L Hopper,Richard S Houlston,Anthony Howell,David J Hunter,Hidemi Ito,Anna Jakubowska,Helena Jernström,Esther M John,Nichola Johnson,Michael E Jones,Vijai Joseph,Rudolf Kaaks,Daehee Kang,Sung-Won Kim,Cari M Kitahara,Linetta B Koppert,Veli-Matti Kosma,Peter Kraft,Vessela N Kristensen,Katerina Kubelka-Sabit,Stella Koutros,Allison W Kurian,Ava Kwong,James V Lacey,Diether Lambrechts,Loic Le Marchand,Jingmei Li,Jan Lubiński,Michael Lush,Arto Mannermaa,Mehdi Manoochehri,Sara Margolin,Keitaro Matsuo,Dimitrios Mavroudis,Kyriaki Michailidou,Roger L Milne,Nur Aishah Mohd Taib,Anna Marie Mulligan,Patrick Neven,William G Newman,Nadia Obi,Kenneth Offit,Andrew F Olshan,Sue K Park,Tjoung-Won Park-Simon,Alpa V Patel,Dijana Plaseska-Karanfilska,Coralie Poncet,Ross L Prentice,Nadege Presneau,Renate Prevos,Katri Pylkäs,Paolo Radice,Gad Rennert,Hedy S Rennert,Atocha Romero,Emmanouil Saloustros,Elinor J Sawyer,Rita K Schmutzler,Lukas Schwentner,Christopher Scott,Mitul Shah,Chen-Yang Shen,Xiao-Ou Shu,Xueling Sim,Melissa C Southey,Jennifer Stone,Daniel O Stram,Rulla M Tamimi,Soo Hwang Teo,Lauren R Teras

Journal

Journal of Clinical Oncology

Published Date

2023/4/1

PURPOSE A polygenic risk score (PRS) consisting of 313 common genetic variants (PRS313) is associated with risk of breast cancer and contralateral breast cancer. This study aimed to evaluate the association of the PRS313 with clinicopathologic characteristics of, and survival following, breast cancer. METHODS Women with invasive breast cancer were included, 98,397 of European ancestry and 12,920 of Asian ancestry, from the Breast Cancer Association Consortium (BCAC), and 683 women from the European MINDACT trial. Associations between PRS313 and clinicopathologic characteristics, including the 70-gene signature for MINDACT, were evaluated using logistic regression analyses. Associations of PRS313 (continuous, per standard deviation) with overall survival (OS) and breast cancer–specific survival (BCSS) were evaluated with Cox regression, adjusted for clinicopathologic characteristics and …

Epigenome-wide association study of urinary total nicotine equivalents in multiethnic current smokers from three prospective cohorts

Authors

Brian Z Huang,Alexandra M Binder,Brandon Quon,Yesha M Patel,Annette Lum Jones,Maarit Tiirikainen,Sharon E Murphy,Lenora Loo,Alika K Maunakea,Christopher A Haiman,Lynne R Wilkens,Woon Poh Koh,Qiuyin Cai,Melinda C Aldrich,Kimberly D Siegmund,Stephen S Hecht,Jian Min Yuan,William J Blot,Daniel O Stram,Loic Le Marchand,Sungshim L Park

Journal

ISEE Conference Abstracts

Published Date

2023/9/21

BACKGROUND AND AIM Prior epidemiologic studies have observed that the influence of smoking on lung cancer risk varies by race/ethnicity. This disparity may be partially explained by interethnic differences in the mechanism in which smoking impacts blood DNA methylation. While many studies have investigated the associations between smoking status and DNA methylation, the effect of internal smoking dose on the epigenome has been less investigated, especially across racial/ethnic populations. METHOD We conducted a two-stage epigenome-wide association study (EWAS) of internal smoking dose, as measured by urinary total nicotine equivalents (TNE), in six racial/ethnic groups across three cohort studies. The discovery phase was performed in 1,994 smokers from five racial/ethnic groups (White, African American, Latino, Japanese American and Native Hawaiian) in the Multiethnic Cohort Study …

Correction to: Epidemiological Studies of Low-Dose Ionizing Radiation and Cancer: Summary Bias Assessment and Meta-Analysis

Authors

Elisabeth Cardis,Harry M Cullings,Gerald Kendall,Dominique Laurier,Martha S Linet,Mark P Little,Jay H Lubin,Dale L Preston,David B Richardson,Daniel O Stram,Isabelle Thierry-Chef,Mary K Schubauer-Berigan,Ethel S Gilbert

Journal

Journal of the National Cancer Institute Monographs

Published Date

2023

Canadian cardiac imaging Eisenberg et al. 2011 (25) 0.3 1 x French Pediatric CT (brain tumors) Journey et al. 2016 (26) 0.7 1 1 UK Pediatric CT (brain tumors) Berrington et al. 2016 (27) 1.2 1 1 PIRATES (thyroid cancer) Lubin et al. 2017 (28) 0.96 1 1 OccupationalKorean workers Ahn et al. 2008 (29) 0.72 1 x UKNRRW Muirhead et al. 2009 (30) 0.03 1 1 Korean nuclear workers Jeong et al. 2010 (31) 0.21 1 1 Rocketdyne workers Boice et al. 2011 (32) À0. 02 0 0 Japanese workers Akiba et al. 2012 (33) 0.13 1 X Canadian nuclear workers Zablotska et al. 2014 (34) À0. 12 0 0 German nuclear workers Merzenich et al. 2014 (35) À0. 1 0 0 US nuclear workers Schubauer-Berigan et al. 2015 (36) 0.01 1 1 USRT (breast cancer) Preston et al. 2016 (12) 0.07 1 X USRT (brain cancer) Kitahara et al. 2017 (10) 0.1 1 1 USRT (skin cancer) Lee et al. 2015 (11) À0. 001 0 0 French nuclear workers Leuraud et al 2017 (37) 0.04 1 …

Association of urinary biomarkers of smoking-related toxicants with lung cancer incidence in smokers: The Multiethnic Cohort Study

Authors

Shannon S Cigan,Sharon E Murphy,Daniel O Stram,Stephen S Hecht,Loïc Le Marchand,Irina Stepanov,Sungshim L Park

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2023/3/6

Background While cigarette smoking is the leading cause of lung cancer, the majority of smokers do not develop the disease over their lifetime. The inter-individual differences in risk among smokers may in part be due to variations in exposure to smoking-related toxicants. Methods Using data from a subcohort of 2,309 current smokers at the time of urine collection from the Multiethnic Cohort Study, we prospectively evaluated the association of ten urinary biomarkers of smoking-related toxicants [total nicotine equivalents (TNE), a ratio of total trans-3′-hydroxycotinine (3-HCOT)/cotinine (a phenotypic measure of CYP2A6 enzymatic activity), 4-(methylnitrosamino)-1–3-(pyridyl)-1-butanol (NNAL), S-phenylmercapturic acid (SPMA), 3-hydroxypropyl mercapturic acid (3-HPMA), phenanthrene tetraol (PheT), 3-hydroxyphenanthrene (PheOH), the ratio of PheT/PheOH, cadmium (Cd …

Particulate matter, traffic-related air pollutants, and circulating C-reactive protein levels: The Multiethnic Cohort Study

Authors

Meera Sangaramoorthy,Juan Yang,Chiuchen Tseng,Jun Wu,Beate Ritz,Timothy V Larson,Scott Fruin,Daniel O Stram,Sung-shim Lani Park,Adrian A Franke,Lynne R Wilkens,Jonathan M Samet,Loïc Le Marchand,Salma Shariff-Marco,Christopher A Haiman,Anna H Wu,Iona Cheng

Journal

Environmental Pollution

Published Date

2023/9/1

Inhaled particles and gases can harm health by promoting chronic inflammation in the body. Few studies have investigated the relationship between outdoor air pollution and inflammation by race and ethnicity, socioeconomic status, and lifestyle risk factors. We examined associations of particulate matter (PM) and other markers of traffic-related air pollution with circulating levels of C-reactive protein (CRP), a biomarker of systemic inflammation. CRP was measured from blood samples obtained in 1994–2016 from 7,860 California residents participating in the Multiethnic Cohort (MEC) Study. Exposure to PM (aerodynamic diameter ≤2.5 μm [PM2.5], ≤10 μm [PM10], and between 2.5 and 10 μm [PM10-2.5]), nitrogen oxides (NOx, including nitrogen dioxide [NO2]), carbon monoxide (CO), ground-level ozone (O3), and benzene averaged over one or twelve months before blood draw were estimated based on …

Genome-wide association study (GWAS) of host germline variation and the gut microbiome: The Multiethnic Cohort Study

Authors

Meredith Hullar,Keith Curtis,Yuqing Li,Johanna Lampe,Isaac Jenkins,Timothy Randolph,Unhee Lim,Lynn Wilkens,Loic Le Marchand,Bruce Kristal,Kristine Monroe,Kechen Zhao,Daniel Stram,Iona Cheng

Published Date

2023/1/17

Patterns of microbiome diversity vary across human populations largely driven by lifestyle and environmental factors. However, differences in genetically-encoded traits in the host may also be important in shaping the microbiome and related health outcomes. We report results from a GWAS of the gut microbiome in 5,202 individuals from the Multiethnic Cohort Study, including African American, Japanese American, Native Hawaiian, Latino, and White individuals. Genotyping was derived from previous studies (n= 3,337) using various Illumina Infinium arrays (660,000 to 2.5 million SNPs) and the MEGA EX array (n= 1,865). Single nucleotide polymorphism (SNP) imputation was conducted using a cosmopolitan reference panel from the 1000 Genomes Project. The stool microbiome was assessed by paired-end sequencing (Illumina MiSeq) of the16S rRNA gene (V 1− 3). SNP-genera association tests were conducted using ordinal logistic regression with quintiles of bacterial abundance regressed on SNPs, adjusted for age, ancestry estimates, season of sample collection, batch, and genotyping study, using a genome-wide statistical significance threshold of p< 5* 10− 8. We identified associations between 53 SNPs in 11 human chromosomes and 16 bacterial/archaeal genera at p< 5* 10− 8. The SNPs in coding regions were categorized into broad categories: human genes known to be exploited by bacterial pathogens; genes involved in nutrition, obesity, diabetes, and cancer; and immune function. Most significantly, Bifidobacterium abundance was associated with 2 known SNPs on chromosome 2 (rs182549 p= 3.8* 10− 11; rs4988235 4.8* 10 …

Racial, ethnic, and socioeconomic differences in a deficit accumulation frailty index in the Multiethnic Cohort Study

Authors

Anna H Wu,V Wendy Setiawan,Daniel O Stram,Eileen M Crimmins,Chiu-Chen Tseng,Unhee Lim,Song-Yi Park,Kami K White,Iona Cheng,Christopher A Haiman,Lynne R Wilkens,Loïc Le Marchand

Journal

The Journals of Gerontology: Series A

Published Date

2023/7/1

Background Frailty status has been sparsely studied in some groups including Native Hawaiians and Asian Americans. Methods We developed a questionnaire-based deficit accumulation frailty index (FI) in the Multiethnic Cohort (MEC) and examined frailty status (robust, FI 0 to <0.2, prefrail, FI 0.2 to <0.35, and frail FI ≥ 0.35) among 29 026 men and 40 756 women. Results After adjustment for age, demographic, lifestyle factors, and chronic conditions, relative to White men, odds of being frail was significantly higher (34%–54%) among African American, Native Hawaiian, and other Asian American men, whereas odds was significantly lower (36%) in Japanese American men and did not differ in Latino men. However, among men who had high school or less, none of the groups displayed significantly higher odds of prefrail or frail compared with White men …

Diet quality and pancreatic cancer incidence in the Multiethnic Cohort

Authors

Heather Steel,Song-Yi Park,Tiffany Lim,Daniel O Stram,Carol J Boushey,James R Hébert,Loïc Le Marchand,Anna H Wu,Veronica Wendy Setiawan

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2023/1/9

Background Data on diet quality and pancreatic cancer are limited. We examined the relationship between diet quality, assessed by the Healthy Eating Index-2015 (HEI-2015), the Alternative Healthy Eating Index-2010 (AHEI-2010), the alternate Mediterranean Diet (aMED) score, the Dietary Approaches to Stop Hypertension (DASH) score and the energy-adjusted Dietary Inflammatory Index (E-DII), and pancreatic cancer incidence in the Multiethnic Cohort Study. Methods Diet quality scores were calculated from a validated food frequency questionnaire administered at baseline. Cox models were used to calculate HR and 95% confidence intervals (CI) adjusted for age, sex, race/ethnicity, education, diabetes, family history of pancreatic cancer, physical activity, smoking variables, total energy intake, body mass index (BMI), and alcohol consumption. Stratified analyses by sex …

Examining ultrafine particle pollution and lung cancer risk in a large, diverse cohort.

Authors

Arthur Bookstein,Justine Po,Iona Cheng,Anna H Wu,Timothy V Larson,Lani Park,Jun Wu,Salma Shariff-Marco,Pushkar Inamdar,Veronica Wendy Setiawan,Mindy DeRouen,Scarlett L Gomez,Loic Le Marchand,Daniel Stram,Jonathan Samet,Beate Ritz,Scott A Fruin

Published Date

2023/6/1

8532Background: Health effects associated with particles less than 2.5 μm in diameter (PM2.5) have been well studied, leading to the establishment of air quality standards and routine monitoring. Additionally, there is growing experimental evidence that ultrafine particles (UFPs), defined as particles less than 0.1µm in diameter, may adversely affect lung health, eliciting greater injury than larger particles due to deeper penetration into airways and longer retention in the lung parenchyma. Only two epidemiological studies have investigated this topic, finding no associations between ambient UFPs and respiratory mortality or overall lung cancer incidence respectively. Given the limited epidemiologic investigation of UFPs and lung cancer, we examined the association between airport-related UFPs and lung cancer incidence in a large, racially and ethnically diverse cohort. Methods: We estimated airport-related UFP …

Association of Endocrine Disrupting Chemicals With the Metabolic Syndrome Among Women in the Multiethnic Cohort Study

Authors

Yun Fan,Chengzhe Tao,Zhi Li,Yuna Huang,Wenkai Yan,Shuangshuang Zhao,Beibei Gao,Qiaoqiao Xu,Yufeng Qin,Xinru Wang,Zhihang Peng,Adrian Covaci,You Li,Yankai Xia,Chuncheng Lu

Journal

Environmental Science & Technology

Published Date

2023/2/2

Wide exposure to endocrine-disrupting chemicals (EDCs) poses a great risk on human health. However, few large-scale cohort studies have comprehensively estimated the association between EDCs exposure and mortality risk. This study aimed to investigate the association of urinary EDCs exposure with mortality risk and quantify attributable mortality and economic loss. Multivariable Cox proportional hazards regression models were performed to investigate the association of 38 representative EDCs exposure with mortality risk in the National Health and Nutrition Examination Survey (NHANES). During a median follow-up of 7.7 years, 47,279 individuals were enrolled. All-cause mortality was positively associated with 1-hydroxynaphthalene, 2-hydroxynaphthalene, cadmium, antimony, cobalt, and monobenzyl phthalate. Cancer mortality was positively associated with cadmium. Cardiovascular disease (CVD …

Identifying DNA methylation quantitative trait loci across multi-ethnic populations

Authors

Lang Wu,Xiequn Xu,Dalia Ghoneim,Kayla Kim,Alexandra Binder,Yesha Patel,Daniel O Stram,Loïc Le Marchand,Sungshim L Park

Journal

Cancer Research

Published Date

2022/6/15

Objective: To date, genome-wide association studies (GWAS), which are primarily conducted in Europeans, have identified a large number of validated DNA methylation quantitative trait loci (meQTLs) acting in both cis and trans. However, it is recognized that there are racial differences in genetic architectures such as allele frequencies and linkage equilibrium patterns, which may differentially influence DNA methylation levels. This points to a critical need to conduct a methylome wide association study (MWAS) to identify meQTLs across multiethnic populations including understudied African Americans (AAs), Latinos, Japanese Americans (JAs), and Native Hawaiians (NHs). Methods: We are performing a GWAS to identify meQTLs in blood leukocytes in a multiethnic population using data from the Multiethnic Cohort Study (MEC). In MEC, “genome-wide” germline genetic variants and DNA methylation levels of …

Abstract PO-170: Association between outdoor ambient benzene and invasive breast cancer incidence: The Multiethnic Cohort Study

Authors

Ugonna Ihenacho,Jun Wu,Chiu-Chen Tseng,Juan Yang,Scott Fruin,Timothy Larson,Salma Shariff-Marco,Loic Le Marchand,Daniel Stram,Beate Ritz,Iona Cheng,Anna H Wu

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2022/1/1

Background: Benzene is classified as a Group 1 carcinogen in humans. A major pathway of benzene exposure is through the inhalation of ambient air contaminated by emissions from motor vehicle exhaust, gas stations, industries, tobacco smoke, and other consumer products. Past studies on benzene and breast cancer based on job titles or occupational history have yielded mixed results and the role of ambient benzene and breast cancer risk has been sparsely studied. Within the California component of the Multiethnic Cohort study, we examined the association between outdoor exposure to benzene and breast cancer risk among four major U.S. racial/ethnic groups―African Americans, Latinos, Japanese Americans, and Whites. Methods: Outdoor ambient benzene exposure was estimated from U.S. EPA measurements from air monitoring stations that were within 15 km of residences of 57,589 female MEC …

Predicted gene expression in ancestrally diverse populations leads to discovery of susceptibility loci for lifestyle and cardiometabolic traits

Authors

Heather M Highland,Genevieve L Wojcik,Mariaelisa Graff,Katherine K Nishimura,Chani J Hodonsky,Antoine R Baldassari,Alanna C Cote,Iona Cheng,Christopher R Gignoux,Ran Tao,Yuqing Li,Eric Boerwinkle,Myriam Fornage,Jeffrey Haessler,Lucia A Hindorff,Yao Hu,Anne E Justice,Bridget M Lin,Danyu Lin,Daniel O Stram,Christopher A Haiman,Charles Kooperberg,Loic Le Marchand,Tara C Matise,Eimear E Kenny,Christopher S Carlson,Eli A Stahl,Christy L Avery,Kari E North,Jose Luis Ambite,Steven Buyske,Ruth J Loos,Ulrike Peters,Kristin L Young,Stephanie A Bien,Laura M Huckins

Journal

The American Journal of Human Genetics

Published Date

2022/4/7

One mechanism by which genetic factors influence complex traits and diseases is altering gene expression. Direct measurement of gene expression in relevant tissues is rarely tenable; however, genetically regulated gene expression (GReX) can be estimated using prediction models derived from large multi-omic datasets. These approaches have led to the discovery of many gene-trait associations, but whether models derived from predominantly European ancestry (EA) reference panels can map novel associations in ancestrally diverse populations remains unclear. We applied PrediXcan to impute GReX in 51,520 ancestrally diverse Population Architecture using Genomics and Epidemiology (PAGE) participants (35% African American, 45% Hispanic/Latino, 10% Asian, and 7% Hawaiian) across 25 key cardiometabolic traits and relevant tissues to identify 102 novel associations. We then compared associations …

Abstract PO-204: Cigarette smoking and risk of prostate cancer in the Multiethnic Cohort Study

Authors

Anqi Wang,Peggy Wan,Daniel O Stram,Lynne R Wilkens,Loic Le Marchand,Christopher A Haiman

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2022/1/1

Evidence regarding the association of cigarette smoking and prostate cancer (PCa) risk has been mixed and mostly based on studies in White populations. To provide additional information on the topic, we assessed the relation between smoking and PCa risk and mortality in a large multi-ethnic population, while considering the effect of PSA screening. We included 74,598 White, African American, Native Hawaiian, Japanese American, and Latino men from the Multiethnic Cohort Study in Hawaii and California (1993-2017). During 21.5 years of follow-up, we documented 8,696 PCa cases and 1,171 deaths from PCa. Smoking status, pack years, and age at initiation were obtained at baseline. Total nicotine equivalents (TNE) for smokers were imputed by an algorithm developed based on a subset of participants (n=2,239) who measured urine TNE. We used multivariable-adjusted Cox proportional hazard …

Dosimetry and uncertainty approaches for the million person study of low-dose radiation health effects: overview of the recommendations in NCRP Report No. 178

Authors

Lawrence T Dauer,André Bouville,Richard E Toohey,John D Boice Jr,Harold L Beck,Keith F Eckerman,Derek Hagemeyer,Richard W Leggett,Michael T Mumma,Bruce Napier,Kathy H Pryor,Marvin Rosenstein,David A Schauer,Sami Sherbini,Daniel O Stram,James L Thompson,John E Till,R Craig Yoder,Cary Zeitlin

Published Date

2022/4/3

PurposeScientific Committee 6–9 was established by the National Council on Radiation Protection and Measurements (NCRP), charged to provide guidance in the derivation of organ doses and their uncertainty, and produced a report, NCRP Report No. 178, Deriving Organ Doses and their Uncertainty for Epidemiologic Studies with a focus on the Million Person Study of Low-Dose Radiation Health Effects (MPS). This review summarizes the conclusions and recommendations of NCRP Report No. 178, with a concentration on and overview of the dosimetry and uncertainty approaches for the cohorts in the MPS, along with guidelines regarding the essential approaches used to estimate organ doses and their uncertainties (from external and internal sources) within the framework of an epidemiologic study.ConclusionsThe success of the MPS is tied to the validity of the dose reconstruction approaches to provide …

Abstract PO-258: Disparities in eligibility for low-dose CT (LDCT) lung cancer screening among a multiethnic population

Authors

S Lani Park,Kyla Yamashita,Lenora Loo,Daniel Stram,Yurii Shvetsov,Loic Le Marchand

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2022/1/1

Introduction: African Americans and Native Hawaiians have a higher risk of lung cancer and greater mortality rate than other racial/ethnic groups in the US. The guidelines for lung cancer screening by low-dose CT scan were derived from clinical trial data conducted primarily in white men. In 2021, to address the underlying ethnic/racial disparities in eligibility for lung cancer screening the United States Preventive Services Task Force (USPSTF) updated the 2013 guidelines from 55-80 years of age, current or former smokers (quit ≤15 years) with a 30 pack-year smoking history to include ever smokers ≥50 years of age and with a ≥20 pack-year history. We hypothesize that the disparities in eligibility across race/ethnicity will remain due to the greater age-specific risk and lower pack-years among African Americans and Native Hawaiians. Methods: We used the Multiethnic Cohort study (MEC) data to examine …

Traffic-related air pollution and lung cancer incidence: the California Multiethnic Cohort Study

Authors

Iona Cheng,Juan Yang,Chiuchen Tseng,Jun Wu,Salma Shariff-Marco,Sung-shim Lani Park,Shannon M Conroy,Pushkar P Inamdar,Scott Fruin,Timothy Larson,Veronica W Setiawan,Mindy C DeRouen,Scarlett Lin Gomez,Lynne R Wilkens,Loïc Le Marchand,Daniel O Stram,Jonathan Samet,Beate Ritz,Anna H Wu

Journal

American journal of respiratory and critical care medicine

Published Date

2022/10/15

Rationale: Although the contribution of air pollution to lung cancer risk is well characterized, few studies have been conducted in racially, ethnically, and socioeconomically diverse populations. Objectives: To examine the association between traffic-related air pollution and risk of lung cancer in a racially, ethnically, and socioeconomically diverse cohort. Methods: Among 97,288 California participants of the Multiethnic Cohort Study, we used Cox proportional hazards regression to examine associations between time-varying traffic-related air pollutants (gaseous and particulate matter pollutants and regional benzene) and lung cancer risk (n = 2,796 cases; average follow-up = 17 yr), adjusting for demographics, lifetime smoking, occupation, neighborhood socioeconomic status (nSES), and lifestyle factors. Subgroup analyses were conducted for race, ethnicity, nSES, and other factors. Measurements and Main …

Prognostic utility of self‐reported sarcopenia (SARC‐F) in the Multiethnic Cohort

Authors

Anna H Wu,V Wendy Setiawan,Unhee Lim,Chiu‐Cheng Tseng,Kami K White,John Shepherd,Heinz Josef Lenz,Iona Cheng,Daniel O Stram,Christopher Haiman,Lynne R Wilkens,Loïc Le Marchand

Journal

Journal of Cachexia, Sarcopenia and Muscle

Published Date

2022/4

Background Age‐related loss in skeletal muscle mass, quality, and strength, known as sarcopenia, is a well‐known phenomenon of aging and is determined clinically using methods such as dual‐energy X‐ray absorptiometry (DXA). However, these clinical methods to measure sarcopenia are not practical for population‐based studies, and a five‐question screening tool known as SARC‐F has been validated to screen for sarcopenia. Methods We investigated the relationship between appendicular skeletal lean mass/height2 (ALM/HT2) (kg/m2) assessed by DXA and SARC‐F in a subset of 1538 (778 men and 760 women) participants in the Multiethnic Cohort (MEC) Study after adjustment for race/ethnicity, age, and body mass index (BMI) at the time of DXA measurement. We then investigated the association between SARC‐F and mortality among 71 283 (41 757 women and 29 526 men) participants in the MEC …

Quantitation of DNA adducts resulting from acrolein exposure and lipid peroxidation in oral cells of cigarette smokers from three racial/ethnic groups with differing risks for …

Authors

Sungshim L Park,Loic Le Marchand,Guang Cheng,Silvia Balbo,Menglan Chen,Steven G Carmella,Nicole M Thomson,Younghan Lee,Yesha M Patel,Daniel O Stram,Joni Jensen,Dorothy K Hatsukami,Sharon E Murphy,Stephen S Hecht

Journal

Chemical research in toxicology

Published Date

2022/8/23

The Multiethnic Cohort Study has demonstrated that the risk for lung cancer in cigarette smokers among three ethnic groups is highest in Native Hawaiians, intermediate in Whites, and lowest in Japanese Americans. We hypothesized that differences in levels of DNA adducts in oral cells of cigarette smokers would be related to these differing risks of lung cancer. Therefore, we used liquid chromatography-nanoelectrospray ionization-high resolution tandem mass spectrometry to quantify the acrolein-DNA adduct (8R/S)-3-(2′-deoxyribos-1′-yl)-5,6,7,8-tetrahydro-8-hydroxypyrimido[1,2-a]purine-10(3H)-one (γ-OH-Acr-dGuo, 1) and the lipid peroxidation-related DNA adduct 1,N6-etheno-dAdo (εdAdo, 2) in DNA obtained by oral rinse from 101 Native Hawaiians, 101 Whites, and 79 Japanese Americans. Levels of urinary biomarkers of nicotine, acrolein, acrylonitrile, and a mixture of crotonaldehyde, methyl vinyl …

Outdoor ambient air pollution and breast cancer survival among California participants of the Multiethnic Cohort Study

Authors

Iona Cheng,Juan Yang,Chiuchen Tseng,Jun Wu,Shannon M Conroy,Salma Shariff-Marco,Scarlett Lin Gomez,Alice S Whittemore,Daniel O Stram,Loïc Le Marchand,Lynne R Wilkens,Beate Ritz,Anna H Wu

Journal

Environment international

Published Date

2022/3/1

BackgroundWithin the Multiethnic Cohort (MEC), we examined the association between air pollution and mortality among African American, European American, Japanese American, and Latina American women diagnosed with breast cancer.MethodsWe used a land use regression (LUR) model and kriging interpolation to estimate nitrogen oxides (NOx , NO2) and particulate matter (PM2.5, PM10) exposures for 3,089 breast cancer cases in the MEC, who were diagnosed from 1993 through 2013 and resided largely in Los Angeles County, California. Cox proportional hazards models were used to examine the association of time-varying air pollutants with all-cause, breast cancer, cardiovascular disease (CVD), and non-breast cancer/non-CVD mortality, accounting for key covariates.ResultsWe identified 1,125 deaths from all causes (474 breast cancer, 272 CVD, 379 non-breast cancer/non-CVD deaths) among …

Multiethnic prediction of nicotine biomarkers and association with nicotine dependence

Authors

Andrew W Bergen,Christopher S McMahan,Stephen McGee,Carolyn M Ervin,Hilary A Tindle,Loïc Le Marchand,Sharon E Murphy,Daniel O Stram,Yesha M Patel,Sungshim L Park,James W Baurley

Journal

Nicotine and Tobacco Research

Published Date

2021/12/1

Introduction The nicotine metabolite ratio and nicotine equivalents are measures of metabolism rate and intake. Genome-wide prediction of these nicotine biomarkers in multiethnic samples will enable tobacco-related biomarker, behavioral, and exposure research in studies without measured biomarkers. Aims and Methods We screened genetic variants genome-wide using marginal scans and applied statistical learning algorithms on top-ranked genetic variants, age, ethnicity and sex, and, in additional modeling, cigarettes per day (CPD), (in additional modeling) to build prediction models for the urinary nicotine metabolite ratio (uNMR) and creatinine-standardized total nicotine equivalents (TNE) in 2239 current cigarette smokers in five ethnic groups. We predicted these nicotine biomarkers using model ensembles and evaluated external validity using dependence measures in 1864 treatment-seeking smokers in …

Risk of breast cancer and prediagnostic urinary excretion of bisphenol A, triclosan and parabens: The Multiethnic Cohort Study

Authors

Anna H Wu,Adrian A Franke,Lynne R Wilkens,Chiuchen Tseng,Shannon M Conroy,Yuqing Li,Meera Sangaramoorthy,Linda M Polfus,Mindy C DeRouen,Christian Caberto,Christopher Haiman,Daniel O Stram,Loïc Le Marchand,Iona Cheng

Journal

International Journal of Cancer

Published Date

2021/10/1

Exposure to bisphenol A (BPA), triclosan and parabens is widespread but their impact on breast cancer risk remains unclear. This nested case‐control study investigated endocrine‐disrupting chemicals (EDCs) and breast cancer risk within the Multiethnic Cohort (MEC). We measured prediagnostic urinary BPA, triclosan and parabens in 1032 postmenopausal women with breast cancer (48 African American, 77 Latino, 155 Native Hawaiian, 478 Japanese American and 274 White) and 1030 individually matched controls, using a sensitive and validated liquid chromatography mass spectrometry assay. Conditional logistic regression was used to examine risk with these EDCs with adjustment for creatinine and potential confounders. In all women, breast cancer risk was not associated with BPA (Ptrend = 0.53) and was inversely associated with triclosan (ORT3 vs T1 = 0.83, 95% CI: 0.66‐1.04, Ptrend = 0.045) and …

Ethnic differences in excretion of butadiene–DNA adducts by current smokers

Authors

Caitlin C Jokipii Krueger,S Lani Park,Guru Madugundu,Yesha Patel,Loic Le Marchand,Daniel O Stram,Natalia Tretyakova

Journal

Carcinogenesis

Published Date

2021/5/1

1,3-Butadiene (BD) is a known human carcinogen used in the synthetic polymer industry and also found in cigarette smoke, automobile exhaust and wood burning smoke. BD is metabolically activated by cytochrome P450 monooxygenases (CYP) 2E1 and 2A6 to 3,4-epoxy-1-butene (EB), which can be detoxified by GST-catalyzed glutathione conjugation or hydrolysis. We have previously observed ethnic differences in urinary levels of EB–mercapturic acids in white, Japanese American and Native Hawaiian smokers. In the present study, similar analyses were extended to urinary BD–DNA adducts. BD-induced N7-(1-hydroxy-3-buten-2-yl) guanine (EB–GII) adducts were quantified in urine samples obtained from smokers and non-smokers belonging to three racial/ethnic groups: white, Japanese American and Native Hawaiian. After adjusting for sex, age, nicotine equivalents, body mass index and batch, we …

Associations of the gut microbiome with hepatic adiposity in the Multiethnic Cohort Adiposity Phenotype Study

Authors

Meredith AJ Hullar,Isaac C Jenkins,Timothy W Randolph,Keith R Curtis,Kristine R Monroe,Thomas Ernst,John A Shepherd,Daniel O Stram,Iona Cheng,Bruce S Kristal,Lynne R Wilkens,Adrian Franke,Loic Le Marchand,Unhee Lim,Johanna W Lampe

Journal

Gut microbes

Published Date

2021/1/1

Nonalcoholic fatty liver disease (NAFLD) is a risk factor for liver cancer and prevalence varies by ethnicity. Along with genetic and lifestyle factors, the gut microbiome (GM) may contribute to NAFLD and its progression to advanced liver disease. Our cross-sectional analysis assessed the association of the GM with hepatic adiposity among African American, Japanese American, White, Latino, and Native Hawaiian participants in the Multiethnic Cohort. We used MRI to measure liver fat and determine nonalcoholic fatty liver disease (NAFLD) status (n = 511 cases) in 1,544 participants, aged 60–77 years, with 12–53% overall adiposity (BMI of 17.8–46.2 kg/m2). The GM was measured by 16S rRNA gene sequencing and, on a subset, by metagenomic sequencing. Alpha diversity was lower overall with NAFLD and in certain ethnicities (African Americans, Whites, and Latinos). In models regressing genus on NAFLD …

The association between ambient air pollutants and pancreatic cancer in the Multiethnic Cohort Study

Authors

David Bogumil,Anna H Wu,Daniel Stram,Juan Yang,Chiu-Chen Tseng,Loic Le Marchand,Jun Wu,Iona Cheng,Veronica Wendy Setiawan

Journal

Environmental research

Published Date

2021/11/1

BackgroundPrior studies examining the association between ambient air pollutants and pancreatic cancer have been conducted in racially/ethnically homogeneous samples and have produced mixed results, with some studies supporting evidence of an association with fine particulate matter.MethodsTo further investigate these findings, we estimated exposure levels of particulate matter (PM2.5, PM10) and oxides of nitrogen (NOX, and NO2) using kriging interpolation for 100,527 men and women from the Multiethnic Cohort Study, residing largely in Los Angeles County from 1993 through 2013. We measured the association between these air pollutants and incident pancreatic cancer using Cox proportional hazards models with time-varying pollutant measures, with adjustment for confounding factors.ResultsA total of 821 incident pancreatic cancer and 1,660,488 person-years accumulated over the study period …

Association between airport-related ultrafine particles and risk of malignant brain cancer: a multiethnic cohort study

Authors

Anna H Wu,Scott Fruin,Timothy V Larson,Chiu-Chen Tseng,Jun Wu,Juan Yang,Jennifer Jain,Salma Shariff-Marco,Pushkar P Inamdar,Veronica W Setiawan,Jacqueline Porcel,Daniel O Stram,Loic Le Marchand,Beate Ritz,Iona Cheng

Journal

Cancer research

Published Date

2021/8/15

Ultrafine particles (UFP; diameter less than or equal to 100 nm) may reach the brain via systemic circulation or the olfactory tract and have been implicated in the risk of brain tumors. The effects of airport-related UFP on the risk of brain tumors are not known. Here we determined the association between airport-related UFP and risk of incident malignant brain cancer (n = 155) and meningioma (n = 420) diagnosed during 16.4 years of follow-up among 75,936 men and women residing in Los Angeles County from the Multiethnic Cohort study. UFP exposure from aircrafts was estimated for participants who lived within a 53 km × 43 km grid area around the Los Angeles International Airport (LAX) from date of cohort entry (1993–1996) through December 31, 2013. Cox proportional hazards models were used to estimate the effects of time-varying, airport-related UFP exposure on risk of malignant brain …

Genetic discovery and risk characterization in type 2 diabetes across diverse populations

Authors

Linda M Polfus,Burcu F Darst,Heather Highland,Xin Sheng,Maggie CY Ng,Jennifer E Below,Lauren Petty,Stephanie Bien,Xueling Sim,Wei Wang,Pierre Fontanillas,Yesha Patel,Michael Preuss,Claudia Schurmann,Zhaohui Du,Yingchang Lu,Suhn K Rhie,Joseph M Mercader,Teresa Tusie-Luna,Clicerio González-Villalpando,Lorena Orozco,Cassandra N Spracklen,Brian E Cade,Richard A Jensen,Meng Sun,Yoonjung Yoonie Joo,Ping An,Lisa R Yanek,Lawrence F Bielak,Salman Tajuddin,Aude Nicolas,Guanjie Chen,Laura Raffield,Xiuqing Guo,Wei-Min Chen,Girish N Nadkarni,Mariaelisa Graff,Ran Tao,James S Pankow,Martha Daviglus,Qibin Qi,Eric A Boerwinkle,Simin Liu,Lawrence S Phillips,Ulrike Peters,Chris Carlson,Lynne R Wikens,Loic Le Marchand,Kari E North,Steven Buyske,Charles Kooperberg,Ruth JF Loos,Daniel O Stram,Christopher A Haiman

Journal

Human Genetics and Genomics Advances

Published Date

2021/4/8

Genomic discovery and characterization of risk loci for type 2 diabetes (T2D) have been conducted primarily in individuals of European ancestry. We conducted a multiethnic genome-wide association study of T2D among 53,102 cases and 193,679 control subjects from African, Hispanic, Asian, Native Hawaiian, and European population groups in the Population Architecture Genomics and Epidemiology (PAGE) and Diabetes Genetics Replication and Meta-analysis (DIAGRAM) Consortia. In individuals of African ancestry, we discovered a risk variant in the TGFB1 gene (rs11466334, risk allele frequency (RAF) = 6.8%, odds ratio [OR] = 1.27, p=2.06 × 10−8), which replicated in independent studies of African ancestry (p = 6.26 × 10−23). We identified a multiethnic risk variant in the BACE2 gene (rs13052926, RAF=14.1%, OR=1.08, p=5.75 × 10−9), which also replicated in independent studies (p = 3.45 × 10−4). We …

FP12. 03 Associations of Urinary Biomarkers of Tobacco Toxicants With Lung Cancer Incidence in Smokers: The Multiethnic Cohort Study

Authors

S Cigan,S Murphy,Y Patel,D Stram,L Le Marchand,S Hecht,I Stepanov,S Park

Journal

Journal of Thoracic Oncology

Published Date

2021/10/1

MethodsWe prospectively evaluated the association of 12 urinary biomarkers of nicotine metabolism and tobacco smoking toxicants with lung cancer risk among a subcohort of 2,309 Multiethnic Cohort Study participants who were current smokers at time of urine collection. Participants were followed from the time of urine collection to one of the following endpoints: lung cancer diagnosis, death, or end of follow-up (December 31, 2017). After an average of 13.4 years of study follow-up, 140 incident lung cancer cases were diagnosed. Urinary biomarkers were normalized using a log base 2 transformation. Risk of lung cancer was estimated by the hazard ratios (HR) and 95% confidence intervals (CIs) using Cox proportional hazards models where age was the time metric.ResultsAfter adjusting for decade of birth, sex, race/ethnicity, body mass index, self-reported pack-years, and urinary creatinine, we found that …

Genome-wide association study of pancreatic fat: The Multiethnic Cohort Adiposity Phenotype Study

Authors

Samantha A Streicher,Unhee Lim,S Lani Park,Yuqing Li,Xin Sheng,Victor Hom,Lucy Xia,Loreall Pooler,John Shepherd,Lenora WM Loo,Burcu F Darst,Heather M Highland,Linda M Polfus,David Bogumil,Thomas Ernst,Steven Buchthal,Adrian A Franke,Veronica Wendy Setiawan,Maarit Tiirikainen,Lynne R Wilkens,Christopher A Haiman,Daniel O Stram,Iona Cheng,Loïc Le Marchand

Journal

Plos one

Published Date

2021/7/30

Several studies have found associations between higher pancreatic fat content and adverse health outcomes, such as diabetes and the metabolic syndrome, but investigations into the genetic contributions to pancreatic fat are limited. This genome-wide association study, comprised of 804 participants with MRI-assessed pancreatic fat measurements, was conducted in the ethnically diverse Multiethnic Cohort-Adiposity Phenotype Study (MEC-APS). Two genetic variants reaching genome-wide significance, rs73449607 on chromosome 13q21.2 (Beta = -0.67, P = 4.50x10-8) and rs7996760 on chromosome 6q14 (Beta = -0.90, P = 4.91x10-8) were associated with percent pancreatic fat on the log scale. Rs73449607 was most common in the African American population (13%) and rs79967607 was most common in the European American population (6%). Rs73449607 was also associated with lower risk of type 2 diabetes (OR = 0.95, 95% CI = 0.89–1.00, P = 0.047) in the Population Architecture Genomics and Epidemiology (PAGE) Study and the DIAbetes Genetics Replication and Meta-analysis (DIAGRAM), which included substantial numbers of non-European ancestry participants (53,102 cases and 193,679 controls). Rs73449607 is located in an intergenic region between GSX1 and PLUTO, and rs79967607 is in intron 1 of EPM2A. PLUTO, a lncRNA, regulates transcription of an adjacent gene, PDX1, that controls beta-cell function in the mature pancreas, and EPM2A encodes the protein laforin, which plays a critical role in regulating glycogen production. If validated, these variants may suggest a genetic component for pancreatic fat and a …

Breast cancer risk factors and survival by tumor subtype: pooled analyses from the Breast Cancer Association Consortium

Authors

Anna Morra,Audrey Y Jung,Sabine Behrens,Renske Keeman,Thomas U Ahearn,Hoda Anton-Culver,Volker Arndt,Annelie Augustinsson,Päivi K Auvinen,Laura E Beane Freeman,Heiko Becher,Matthias W Beckmann,Carl Blomqvist,Stig E Bojesen,Manjeet K Bolla,Hermann Brenner,Ignacio Briceno,Sara Y Brucker,Nicola J Camp,Daniele Campa,Federico Canzian,Jose E Castelao,Stephen J Chanock,Ji-Yeob Choi,Christine L Clarke,Fergus J Couch,Angela Cox,Simon S Cross,Kamila Czene,Thilo Dörk,Alison M Dunning,Miriam Dwek,Douglas F Easton,Diana M Eccles,Kathleen M Egan,D Gareth Evans,Peter A Fasching,Henrik Flyger,Manuela Gago-Dominguez,Susan M Gapstur,José A García-Sáenz,Mia M Gaudet,Graham G Giles,Mervi Grip,Pascal Guénel,Christopher A Haiman,Niclas Håkansson,Per Hall,Ute Hamann,Sileny N Han,Steven N Hart,Mikael Hartman,Jane S Heyworth,Reiner Hoppe,John L Hopper,David J Hunter,Hidemi Ito,Agnes Jager,Milena Jakimovska,Anna Jakubowska,Wolfgang Janni,Rudolf Kaaks,Daehee Kang,Pooja Middha Kapoor,Cari M Kitahara,Stella Koutros,Peter Kraft,Vessela N Kristensen,James V Lacey,Diether Lambrechts,Loic Le Marchand,Jingmei Li,Annika Lindblom,Jan Lubiński,Michael Lush,Arto Mannermaa,Mehdi Manoochehri,Sara Margolin,Shivaani Mariapun,Keitaro Matsuo,Dimitrios Mavroudis,Roger L Milne,Taru A Muranen,William G Newman,Dong-Young Noh,Børge G Nordestgaard,Nadia Obi,Andrew F Olshan,Håkan Olsson,Tjoung-Won Park-Simon,Christos Petridis,Paul DP Pharoah,Dijana Plaseska-Karanfilska,Nadege Presneau,Muhammad U Rashid,Gad Rennert,Hedy S Rennert,Valerie Rhenius,Atocha Romero,Emmanouil Saloustros,Elinor J Sawyer,Andreas Schneeweiss,Lukas Schwentner,Christopher Scott,Mitul Shah,Chen-Yang Shen,Xiao-Ou Shu,Melissa C Southey,Daniel O Stram,Rulla M Tamimi,William Tapper,Rob AEM Tollenaar,Ian Tomlinson,Diana Torres,Melissa A Troester,Thérèse Truong,Celine M Vachon,Qin Wang,Sophia S Wang,Justin A Williams,Robert Winqvist,Alicja Wolk,Anna H Wu,Keun-Young Yoo,Jyh-Cherng Yu,Wei Zheng,Argyrios Ziogas,Xiaohong R Yang,A Heather Eliassen,Michelle D Holmes,Montserrat García-Closas,Soo Hwang Teo,Marjanka K Schmidt,Jenny Chang-Claude

Journal

Cancer epidemiology, biomarkers & prevention

Published Date

2021/4/1

Background It is not known whether modifiable lifestyle factors that predict survival after invasive breast cancer differ by subtype. Methods We analyzed data for 121,435 women diagnosed with breast cancer from 67 studies in the Breast Cancer Association Consortium with 16,890 deaths (8,554 breast cancer specific) over 10 years. Cox regression was used to estimate associations between risk factors and 10-year all-cause mortality and breast cancer–specific mortality overall, by estrogen receptor (ER) status, and by intrinsic-like subtype. Results There was no evidence of heterogeneous associations between risk factors and mortality by subtype (Padj > 0.30). The strongest associations were between all-cause mortality and BMI ≥30 versus 18.5–25 kg/m2 [HR (95% confidence interval (CI), 1.19 (1.06–1.34)]; current versus never smoking [1.37 (1.27–1.47 …

Discovery of structural deletions in breast cancer predisposition genes using whole genome sequencing data from> 2000 women of African-ancestry

Authors

Zhishan Chen,Xingyi Guo,Jirong Long,Jie Ping,Bingshan Li,Mary Kay Fadden,Thomas U Ahearn,Daniel O Stram,Xiao-Ou Shu,Guochong Jia,Jonine Figueroa,Julie R Palmer,Maureen Sanderson,Christopher A Haiman,William J Blot,Montserrat Garcia-Closas,Qiuyin Cai,Wei Zheng

Journal

Human genetics

Published Date

2021/10

Single germline nucleotide pathogenic variants have been identified in 12 breast cancer predisposition genes, but structural deletions in these genes remain poorly characterized. We conducted in-depth whole genome sequencing (WGS) in genomic DNA samples obtained from 1340 invasive breast cancer cases and 675 controls of African ancestry. We identified 25 deletions in the intragenic regions of ten established breast cancer predisposition genes based on a consensus call from six state-of-the-art SV callers. Overall, no significant case–control difference was found in the frequency of these deletions. However, 1.0% of cases and 0.3% of controls carried any of the eight putative protein-truncating rare deletions located in BRCA1, BRCA2, CDH1, TP53, NF1, RAD51D, RAD51C and CHEK2, resulting in an odds ratio (OR) of 3.29 (95% CI 0.74–30.16). We also identified a low-frequency deletion in NF1 …

Genome-Wide Association Analyses Identify Variants in IRF4 Associated With Acute Myeloid Leukemia and Myelodysplastic Syndrome Susceptibility

Authors

Junke Wang,Alyssa I Clay-Gilmour,Ezgi Karaesmen,Abbas Rizvi,Qianqian Zhu,Li Yan,Leah Preus,Song Liu,Yiwen Wang,Elizabeth Griffiths,Daniel O Stram,Loreall Pooler,Xin Sheng,Christopher Haiman,David Van Den Berg,Amy Webb,Guy Brock,Stephen Spellman,Marcelo Pasquini,Philip McCarthy,James Allan,Friedrich Stoelzel,Kenan Onel,Theresa Hahn,Lara E Sucheston-Campbell

Journal

Frontiers in Genetics

Published Date

2021/6/17

The role of common genetic variation in susceptibility to acute myeloid leukemia (AML), and myelodysplastic syndrome (MDS), a group of rare clonal hematologic disorders characterized by dysplastic hematopoiesis and high mortality, remains unclear. We performed AML and MDS genome-wide association studies (GWAS) in the DISCOVeRY-BMT cohorts (2,309 cases and 2,814 controls). Association analysis based on subsets (ASSET) was used to conduct a summary statistics SNP-based analysis of MDS and AML subtypes. For each AML and MDS case and control we used PrediXcan to estimate the component of gene expression determined by their genetic profile and correlate this imputed gene expression level with risk of developing disease in a transcriptome-wide association study (TWAS). ASSET identified an increased risk for de novo AML and MDS (OR = 1.38, 95% CI, 1.26-1.51, Pmeta = 2.8 × 10–12) in patients carrying the T allele at s12203592 in Interferon Regulatory Factor 4 (IRF4), a transcription factor which regulates myeloid and lymphoid hematopoietic differentiation. Our TWAS analyses showed increased IRF4 gene expression is associated with increased risk of de novo AML and MDS (OR = 3.90, 95% CI, 2.36-6.44, Pmeta = 1.0 × 10–7). The identification of IRF4 by both GWAS and TWAS contributes valuable insight on the role of genetic variation in AML and MDS susceptibility.

Lung cancer in the Mayak workers cohort: risk estimation and uncertainty analysis

Authors

Daniel O Stram,Mikhail Sokolnikov,Bruce A Napier,Vadim V Vostrotin,Alexander Efimov,Dale L Preston

Journal

Radiation Research

Published Date

2021/4/1

The workers at the Mayak nuclear facility near Ozyorsk, Russia are a primary source of information about exposure to radiation at low-dose rates, since they were subject to protracted exposures to external gamma rays and to internal exposures from plutonium inhalation. Here we re-examine lung cancer mortality rates and assess the effects of external gamma and internal plutonium exposures using recently developed Monte Carlo dosimetry systems. Using individual lagged mean annual lung doses computed from the dose realizations, we fit excess relative risk (ERR) models to the lung cancer mortality data for the Mayak Workers Cohort using risk-modeling software. We then used the corrected-information matrix (CIM) approach to widen the confidence intervals of ERR by taking into account the uncertainty in doses represented by multiple realizations from the Monte Carlo dosimetry systems. Findings of this …

Urinary phthalate exposures and risk of breast cancer: the Multiethnic Cohort study

Authors

Anna H Wu,Adrian A Franke,Lynne R Wilkens,Chiuchen Tseng,Shannon M Conroy,Yuqing Li,Linda M Polfus,Mindy De Rouen,Christian Caberto,Christopher Haiman,Daniel O Stram,Loïc Le Marchand,Iona Cheng

Journal

Breast Cancer Research

Published Date

2021/12

Background The epidemiologic evidence from observational studies on breast cancer risk and phthalates, endocrine disrupting chemicals, has been inconsistent. In the only previous study based on pre-diagnostic urinary phthalates and risk of breast cancer, results were null in mostly white women. Methods We examined the association between pre-diagnostic urinary phthalates and breast cancer in a nested case-control study within the Multiethnic Cohort (MEC) study, presenting the first data from five major racial/ethnic groups in the USA. We measured 10 phthalate metabolites and phthalic acid, using a sensitive liquid chromatography mass spectrometry assay on 1032 women with breast cancer (48 African Americans, 77 Latinos, 155 Native Hawaiians, 478 Japanese Americans, and 274 Whites) and 1030 matched controls. Conditional logistic …

Novel genetic variants associated with mortality after unrelated donor allogeneic hematopoietic cell transplantation

Authors

Theresa Hahn,Junke Wang,Leah M Preus,Ezgi Karaesmen,Abbas Rizvi,Alyssa I Clay-Gilmour,Qianqian Zhu,Yiwen Wang,Li Yan,Song Liu,Daniel O Stram,Loreall Pooler,Xin Sheng,Christopher A Haiman,David Van Den Berg,Amy Webb,Guy Brock,Stephen R Spellman,Kenan Onel,Philip L McCarthy,Marcelo C Pasquini,Lara E Sucheston-Campbell

Journal

EClinicalMedicine

Published Date

2021/10/1

BackgroundIdentification of non-human leukocyte antigen (HLA) genetic risk factors could improve survival after allogeneic blood or marrow transplant (BMT) through matching at additional loci or individualizing risk prediction. We hypothesized that non-HLA loci contributed significantly to 1-year overall survival (OS), disease related mortality (DRM) or transplant related mortality (TRM) after unrelated donor (URD)BMT.MethodsWe performed a genome-wide association study (GWAS) in 2,887 acute myeloid leukemia (AML), myelodysplastic syndrome (MDS) and acute lymphoblastic leukemia (ALL) patients and their ≥8/8 HLA-matched URDs comprising two independent cohorts treated from 2000–2011.FindingsUsing meta-analyses of both cohorts, genome-wide significant associations (p < 5 × 10−8) were identified in: recipient genomes with OS at MBNL1 (rs9990017, HR = 1.4, 95% CI 1.24–1.56, p = 3.3 × 10−8 …

Racial/ethnic disparities in weight or BMI change in adulthood and pancreatic cancer incidence: The multiethnic cohort

Authors

Albert J Farias,Samantha A Streicher,Daniel O Stram,Songren Wang,Stephen J Pandol,Loïic Le Marchand,Veronica W Setiawan

Journal

Cancer Medicine

Published Date

2021/6

Introduction Compared to non‐Hispanic Whites, Japanese Americans, Native Hawaiians, and African Americans have higher incidences of pancreatic cancer (PCa) that are not entirely explained by rates of obesity but may be explained by weight changes throughout adulthood. Methods The multiethnic cohort is a population‐based prospective cohort study that has followed 155,308 participants since its establishment between 1993 and 1996. A total of 1,328 incident cases with invasive PCa were identified through 2015. We conducted separate multivariable Cox proportional hazards models for self‐reported weight‐change and BMI‐change (age 21 to cohort entry) to determine the association with PCa risk, adjusting for potential confounders including weight or BMI at age 21. Results The mean age at cohort entry was 59.3 years (SD 8.9). An increased risk of PCa was associated with: 1) weight (HR per10 lbs …

Ethnic differences of urinary cadmium in cigarette smokers from the multiethnic cohort study

Authors

Shannon S Cigan,Sharon E Murphy,Bruce H Alexander,Daniel O Stram,Dorothy K Hatsukami,Loic Le Marchand,Sungshim L Park,Irina Stepanov

Journal

International journal of environmental research and public health

Published Date

2021/3/6

The Multiethnic Cohort Study (MEC) has demonstrated racial/ethnic differences in smoking-associated lung cancer risk. As part of the ongoing effort to characterize exposure to cigarette smoke constituents and better understand risk differences, we evaluated Cd exposure as it is a known lung carcinogen. We quantified urinary cadmium (Cd) by inductively coupled plasma mass spectrometry in a subset of 1956 current smokers from MEC. Ethnic-specific geometric means (GM) were compared adjusting for age at urine collection, sex, creatinine (natural log), education, and smoking (urinary total nicotine equivalents [TNE] and smoking duration). Self-reported questionnaire data, including occupation, were also considered. Latinos and Native Hawaiians had the highest GM urinary Cd (0.871 and 0.836 ng/mL, respectively) followed by Japanese Americans and African Americans (0.811 ng/mL and 0.807, respectively) and Whites (0.736 ng/mL). Patterns in race/ethnicity were consistent by sex such that females had the highest GM urinary Cd. When further adjusting for categorical occupational Cd exposure, racial/ethnic differences of Cd remained (p = 0.009). Findings suggest differences in urinary Cd among smokers across different racial/ethnic groups exist and highlight the importance in considering environmental sources of Cd exposure beyond smoking. These finding lay ground for future studies of individual characteristics that are associated with lower risk for cancer despite higher carcinogenic exposures.

Abstract PR05: A meta-analysis of genome-wide association study and eQTL analysis of multiple myeloma among African Americans

Authors

Zhaohui Du,Niels Weinhold,Gregory Chi Song,Kristen A Rand,David J Van Den Berg,Amie E Hwang,Xin Sheng,Victor Hom,Sikander Ailawadhi,Ajay K Nooka,Seema Singhal,Karen Pawlish,Edward Peters,Cathryn Bock,Ann Mohrbacher,Alexander Stram,Sonja I Berndt,William J Blot,Graham Casey,Victoria L Stevens,Rick Kittles,Phyllis J Goodman,W Ryan Diver,Anselm Hennis,Barbara Nemesure,Eric A Klein,Benjamin A Rybicki,Janet L Stanford,John S Witte,Lisa Signorello,Esther M John,Leslie Bernstein,Antoinette Stroup,Owen W Stephens,Maurizio Zangari,Frits Van Rhee,Andrew Olshan,Wei Zheng,Jennifer J Hu,Regina Ziegler,Sarah J Nyante,Sue Ann Ingles,Michael Press,John David Carpten,Stephen Chanock,Jayesh Mehta,Graham A Colditz,Jeffrey Wolf,Thomas G Martin,Michael Tomasson,Mark A Fiala,Howard Terebelo,Nalini Janakiraman,Laurence Kolonel,Kenneth C Anderson,Loic Le Marchand,Daniel Auclair,Brian C-H Chiu,Elad Ziv,Daniel Stram,Ravi Vij,Leon Bernal-Mizrachi,Gareth J Morgan,Jeffrey A Zonder,Carol Ann Huff,Sagar Lonial,Robert Z Orlowski,David V Conti,Christopher A Haiman,Wendy Cozen

Journal

Cancer epidemiology, biomarkers & prevention

Published Date

2020/6/1

Background: Persons of African ancestry (AA) experience a 1.5-2-fold risk of multiple myeloma (MM) compared to persons of European ancestry (EA). We assembled a set of MM patients with self-reported AA in order to evaluate the contribution of genetics to etiology in this high-risk group.Methods: Here we present the results of a meta-analysis of two GWAS in 1,813 cases and 8,871 controls of AA. We also conducted an admixture mapping scan to identify risk alleles associated with local ancestry, fine-mapped the 23 known susceptibility loci to find markers that could better capture MM risk in individuals of AA, and constructed a polygenic risk score (PRS) to assess the aggregated effect of known MM risk alleles. Finally, we conducted an eQTL analysis measuring gene expression in those genes harboring a risk variant in malignant plasma cells from 292 of the patients from a single site.Results: In GWAS analysis …

Association between ambient air pollution and breast cancer risk: the multiethnic cohort study

Authors

Iona Cheng,Chiuchen Tseng,Jun Wu,Juan Yang,Shannon M Conroy,Salma Shariff‐Marco,Lianfa Li,Andrew Hertz,Scarlett Lin Gomez,Loïc Le Marchand,Alice S Whittemore,Daniel O Stram,Beate Ritz,Anna H Wu

Journal

International journal of cancer

Published Date

2020/2/1

Previous studies using different exposure methods to assess air pollution and breast cancer risk among primarily whites have been inconclusive. Air pollutant exposures of particulate matter and oxides of nitrogen were estimated by kriging (NOx, NO2, PM10, PM2.5), land use regression (LUR, NOx, NO2) and California Line Source Dispersion model (CALINE4, NOx, PM2.5) for 57,589 females from the Multiethnic Cohort, residing largely in Los Angeles County from recruitment (1993–1996) through 2010. Cox proportional hazards models were used to examine the associations between time‐varying air pollution and breast cancer incidence adjusting for confounding factors. Stratified analyses were conducted by race/ethnicity and distance to major roads. Among all women, breast cancer risk was positively but not significantly associated with NOx (per 50 parts per billion [ppb]) and NO2 (per 20 ppb) determined by …

Estrogen plus progestin hormone therapy and ovarian cancer: a complicated relationship explored

Authors

Alice W Lee,Anna H Wu,Ashley Wiensch,Bhramar Mukherjee,Kathryn L Terry,Holly R Harris,Michael E Carney,Allan Jensen,Daniel W Cramer,Andrew Berchuck,Jennifer Anne Doherty,Francesmary Modugno,Marc T Goodman,Aliya Alimujiang,Mary Anne Rossing,Kara L Cushing-Haugen,Elisa V Bandera,Pamela J Thompson,Susanne K Kjaer,Estrid Hogdall,Penelope M Webb,David G Huntsman,Kirstin B Moysich,Galina Lurie,Roberta B Ness,Daniel O Stram,Lynda Roman,Malcolm C Pike,Celeste Leigh Pearce,Ovarian Cancer Association Consortium

Journal

Epidemiology

Published Date

2020/5/1

Background:Menopausal estrogen-alone therapy is a risk factor for endometrial and ovarian cancers. When a progestin is included with the estrogen daily (continuous estrogen–progestin combined therapy), there is no increased risk of endometrial cancer. However, the effect of continuous estrogen–progestin combined therapy on risk of ovarian cancer is less clear.Methods:We pooled primary data from five population-based case–control studies in the Ovarian Cancer Association Consortium, including 1509 postmenopausal ovarian cancer cases and 2295 postmenopausal controls. Information on previous menopausal hormonal therapy use, as well as ovarian cancer risk factors, was collected using in-person interviews. Logistic regression was used to assess the association between use of continuous estrogen–progestin combined therapy and risk of ovarian cancer by duration and recency of use and disease …

Characteristics of and Risk Factors for Monoclonal Gammopathy of Undetermined Significance (MGUS) in the Multiethnic Cohort Study

Authors

Maryam Salehi,Daniel O Stram,Jose A Aparicio,Liliana Aguinada,Victoria K Cortessis,Maximo J Marin,Loic Le Marchand,Christopher Haiman,Lynne Wilkens,Jane Emerson,Wendy Cozen

Journal

Blood

Published Date

2020/11/5

Background: There is a 2-3-fold excess of both monoclonal gammopathy of undetermined significance (MGUS) and multiple myeloma (MM) among African Americans (AAs) compared to non-Hispanic whites (NHWs) for unknown reasons. It is unclear if risk of progression from MGUS to MM is similar across racial/ethnic groups. We identified MGUS patients and controls from the Multiethnic Cohort (MEC), a population-based cohort study in Los Angeles and Hawaii, described characteristics of and examined risk factors for MGUS among different racial/ethnic groups.Methods: A total of 637 MEC participants with a diagnosis of MGUS by CMS billing codes and 1,065 race/ethnicity-matched MM-free and presumed MGUS-free controls were identified. Screening for monoclonal proteinemia was performed at the USC Clinical Laboratories using serum protein electrophoresis (SPEP) with reflex to immunofixation (IFX …

Epidemiological studies of low-dose ionizing radiation and cancer: summary bias assessment and meta-analysis

Authors

Michael Hauptmann,Robert D Daniels,Elisabeth Cardis,Harry M Cullings,Gerald Kendall,Dominique Laurier,Martha S Linet,Mark P Little,Jay H Lubin,Dale L Preston,David B Richardson,Daniel O Stram,Isabelle Thierry-Chef,Mary K Schubauer-Berigan,Ethel S Gilbert,Amy Berrington de Gonzalez

Journal

JNCI Monographs

Published Date

2020/7

Background Ionizing radiation is an established carcinogen, but risks from low-dose exposures are controversial. Since the Biological Effects of Ionizing Radiation VII review of the epidemiological data in 2006, many subsequent publications have reported excess cancer risks from low-dose exposures. Our aim was to systematically review these studies to assess the magnitude of the risk and whether the positive findings could be explained by biases. Methods Eligible studies had mean cumulative doses of less than 100 mGy, individualized dose estimates, risk estimates, and confidence intervals (CI) for the dose-response and were published in 2006–2017. We summarized the evidence for bias (dose error, confounding, outcome ascertainment) and its likely direction for each study. We tested whether the median excess relative risk (ERR) per unit dose equals zero and …

Abstract PR06: Exposure to phthalates and risk of invasive breast cancer: The Multiethnic Cohort Study

Authors

Anna H Wu,Adrian A Franke,Chiuchen Tseng,Shannon M Conroy,Yuqing S Li,Mindy DeRouen,Linda Polfus,Christian Caberto,Daniel Stram,Chris Haiman,Lynne R Wilkens,Loic Le Marchand,Iona Cheng

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: Phthalates (Phth), known endocrine-disruptors, may play a role in breast carcinogenesis. Low-molecular-weight phthalates (LMWPhth) are commonly found in personal care products while high MWPhth (HMWPhth) are used primarily as plasticizers. Individual Phth may disrupt normal mammary gland development and promote tumorigenesis by binding to and activating the estrogen receptor (ER).Methods: We prospectively examined the association between pre-diagnostic urinary levels of Phth metabolites and breast cancer risk in a case-control study nested within the Multiethnic Cohort (MEC). We measured 11 Phth metabolites and phthalic acid from overnight/first morning urine samples of 798 women with invasive breast cancer (355 Japanese Americans, 218 Whites, 125 Native Hawaiians, 62 Latinos, and 38 African Americans; the latter three groups were combined due to small numbers) and …

A meta-analysis of genome-wide association studies of multiple myeloma among men and women of African ancestry

Authors

Latha Kadalayil,Sofia Khan,Heli Nevanlinna,Peter A Fasching,Fergus J Couch,John Hopper,Jianjun Liu,Tom Maishman,Lorraine Durcan,Carl Bloomqvist,Andy Collins,Dianna Eccles,William Tapper

Journal

Cancer Research

Published Date

2017/7/1

Familial studies were among the first to indicate that breast cancer prognosis has a heritable component. Subsequently many variants associated with prognosis have been identified using a range of techniques including genome-wide association studies (GWAs). Despite these advances, much of the heritability remains unexplained. In young women, breast cancer is characterised by a higher incidence of adverse pathological features, unique tumour gene expression profiles and worse survival. In addition, the association of risk with conventional epidemiological exposures is less clear in women with early onset. We hypothesise that some of these difference between early and late onset could be influenced by germline variation.To identify additional variants that influence breast cancer prognosis we conducted a two stage meta-analysis of four GWAs consisting of 6,042 patients from the UK (POSH), Finland …

Abstract A119: Ethnic and sex differences in exposure to traffic-related air pollutants and lung cancer incidence: The Multiethnic Cohort

Authors

Iona Cheng,Shannon M Conroy,Chiuchen Tseng,Juan Yang,Shahir Masri,Timothy Larson,Scott Fruin,Jennifer Jain,Loic Le Marchand,Jonathan Samet,Scarlett Lin Gomez,Veronica Wendy Setiawan,Sung-Shim Lani Park,Daniel O Stram,Salma Shariff-Marco,Beate Ritz,Jun Wu,Anna H Wu

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Introduction: California has one of the highest levels of air pollution in the nation. Vehicle exhaust contains a mixture of gases and particulate matter that are known to have mutagenic and carcinogenic effects. Our objective was to examine the association between specific traffic-related air pollutants and lung cancer risk by race/ethnicity and sex among participants of the Multiethnic Cohort Study (MEC), residing predominately in Los Angeles County.Methods: Residential addresses from baseline, 1993-1996, through 2013 for over 112,000 California MEC participants were geocoded to latitude and longitude coordinates and used to estimate air pollutant exposures of NO2, NOX, PM10, CO, and O3 based on Bayesian kriging interpolation of state and national government air monitoring data. A total of 2,994 incident lung cancer cases (1,415 African Americans, 732 Latinos, 516 Whites, and 327 Japanese Americans …

Abstract A31: Genome-wide association study (GWAS) of host DNA sequence variation and the gut microbiome in the Multiethnic Cohort

Authors

Meredith A Hullar,Johanna W Lampe,Timothy Randolph,Keith R Curtis,Unhee Lim,Lynne R Wilkens,Loic Le Marchand,Bruce S Kristal,Kris R Monroe,Kechen Zhao,Daniel Stram,Iona Cheng

Journal

Cancer Research

Published Date

2020/4/15

Patterns of microbiome diversity vary across human populations, and although variation is largely driven by diet and lifestyle, genetically encoded differences between hosts may be important in shaping the microbiome and health outcomes, including cancer. We report preliminary results from a GWAS of the gut microbiome in 6,217 individuals from the Multiethnic Cohort Study, including African Americans, Japanese Americans, Native Hawaiians, Latinos, and Whites. Genome-wide SNP data was based on existing data from a variety of Illumina Infinium arrays (500,000 to 2.5 million single nucleotide polymorphisms (SNPs); n=4,363) as well as genotyping 1,853 individuals using the Illumina MEGA EX array. SNP imputation was conducted using a cosmopolitan reference panel of all 1000 Genomes samples. The stool microbiome was assessed by paired-end sequencing (Illumina MiSeq) of the16S rRNA gene (V1 …

Abstract PO-184: Air pollution in relation to risk of pancreatic cancer in the Multiethnic Cohort Study

Authors

David Bogumil,Anna H Wu,Daniel Stram,Chiu-Chen Tseng,Iona Cheng,Veronica Wendy Setiawan

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/12/1

Background: There are limited studies that have investigated the association between ambient gaseous and particulate matter (PM) air pollutants and risk of pancreatic cancer. Results from published studies are inconsistent, the strongest evidence was a significant, 16% increase in risk of pancreatic cancer mortality per 10 µg/m3 increase in PM <2.5 µm (PM2.5) in China. We used data from the Multiethnic Cohort Study to examine prospectively associations between ambient air pollutants and incident pancreatic cancer, while adjusting for a comprehensive list of confounding factors. Methods: Kriging Interpolation was used to estimate individual, time varying, monthly, air pollutant exposure levels of nitrogen oxides (NOX, NO2) and PM (PM2.5, PM10) pollutants for 100,527 men and women, who resided largely in Los Angeles County at the time of enrollment (1993-1996) through 2014. We observed 844 incident …

Variability in cytogenetic testing for multiple myeloma: A comprehensive analysis from across the United States

Authors

Yang Yu,Niquelle Brown Wade,Amie E Hwang,Ajay K Nooka,Mark A Fiala,Ann Mohrbacher,Edward S Peters,Karen Pawlish,Cathryn Bock,David J Van Den Berg,Kristin A Rand,Daniel Stram,David V Conti,Daniel Auclair,Graham A Colditz,Jayesh Mehta,Christopher A Haiman,Howard Terebelo,Nalini Janakiraman,Seema Singhal,Brian Chiu,Ravi Vij,Leon Bernal-Mizrachi,Jeffrey A Zonder,Carol A Huff,Sagar Lonial,Robert Z Orlowski,Wendy Cozen,Sikander Ailawadhi

Journal

JCO Oncology Practice

Published Date

2020/10

PurposeMultiple myeloma (MM) treatment has changed tremendously, with significant improvement in patient out-comes. One group with a suboptimal benefit is patients with high-risk cytogenetics, as tested by conventional karyotyping or fluorescence in situ hybridization (FISH). Methodology for these tests has been published, but not necessarily standardized.MethodsWe address variability in the testing and reporting methodology for MM cytogenetics in the United States using the ongoing African American Multiple Myeloma Study (AAMMS). We evaluated clinical and cytogenetic data from 1,221 patients (1,161 with conventional karyotyping and 976 with FISH) tested between 1998 and 2016 across 58 laboratories nationwide.ResultsInterlab and intralab variability was noted for the number of cells analyzed for karyotyping, with a significantly higher number of cells analyzed in patients in whom cytogenetics were …

Abstract C068: Association between outdoor air pollution and risk of malignant and benign brain diseases: The Multiethnic Cohort Study

Authors

Anna H Wu,Jun Wu,Chiuchen Tseng,Juan Yang,Salma Shariff-Marco,Veronica W Setiawan,Shahir Masri,Jennifer Jain,Jacqueline Porcel,Scott Fruin,Timothy Larson,Florence Hofman,Thomas Chen,Loic Le Marchand,Daniel Stram,Beate Ritz,Iona Cheng

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: The etiology of malignant brain cancer remains largely unknown. The two established risk factors, ionizing radiation and a history of allergies or atopic disease, explain less than 10% of the disease. In 2012, the International Agency for Research on Cancer classified air pollution and particulate matter (PM) as carcinogenic to humans (Group 1). The carcinogenic effects of air pollution may reach the brain via the systemic circulation, crossing the blood-brain barrier. There are increasing concerns about the potential impact of air pollution on outcomes of central nervous system (CNS), including chronic brain inflammation and microglia cell activation, but evidence of its carcinogenic effects is still limited. Methods: Kriging interpolation of air pollution data from monitoring stations were used to estimate long-term exposures of particulate matter pollutants (PM2.5, PM10), gaseous pollutants (oxides of nitrogen …

Issues in interpreting epidemiologic studies of populations exposed to low-dose, high-energy photon radiation

Authors

Ethel S Gilbert,Mark P Little,Dale L Preston,Daniel O Stram

Published Date

2020/7/1

This article addresses issues relevant to interpreting findings from 26 epidemiologic studies of persons exposed to low-dose radiation. We review the extensive data from both epidemiologic studies of persons exposed at moderate or high doses and from radiobiology that together have firmly established radiation as carcinogenic. We then discuss the use of the linear relative risk model that has been used to describe data from both low- and moderate- or high-dose studies. We consider the effects of dose measurement errors; these can reduce statistical power and lead to underestimation of risks but are very unlikely to bring about a spurious dose response. We estimate statistical power for the low-dose studies under the assumption that true risks of radiation-related cancers are those expected from studies of Japanese atomic bomb survivors. Finally, we discuss the interpretation of confidence intervals and …

Urinary N7-(1-hydroxy-3-buten-2-yl) guanine adducts in humans: temporal stability and association with smoking

Authors

Caitlin C Jokipii Krueger,Guru Madugundu,Amanda Degner,Yesha Patel,Daniel O Stram,Timothy R Church,Natalia Tretyakova

Journal

Mutagenesis

Published Date

2020/1

1,3-Butadiene (BD) is a known human carcinogen found in cigarette smoke, automobile exhaust, and urban air. Workers occupationally exposed to BD in the workplace have an increased incidence of leukemia and lymphoma. BD undergoes cytochrome P450-mediated metabolic activation to 3,4-epoxy-1-butene (EB), 1,2,3,4-diepoxybutane (DEB) and 1,2-dihydroxy-3,4-epoxybutane (EBD), which form covalent adducts with DNA. We have previously reported a quantitative nanoLC/ESI+-HRMS3 method for urinary N7-(1-hydroxy-3-buten-2-yl) guanine (EB-GII) adducts as a mechanism-based biomarker of BD exposure. In the present study, the method was updated to include high throughput 96-well solid phase extraction (SPE) and employed to establish urinary EB-GII biomarker stability and association with smoking. Urinary EB-GII levels were measured bimonthly for 1 year in 19 smokers to determine …

Abstract C048: Multiethnic polygenic risk scores and smoking interactions for chronic obstructive lung disease

Authors

Linda M Polfus,Meng Lin,S Lani Park,David Conti,Jackie Porcel,Veronica W Setiawan,Lynne Wilkens,Christopher A Haiman,Loïc Le Marchand,Daniel O Stram

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: Chronic obstructive pulmonary disease (COPD) is the third leading cause of death in the US with differential risk across race/ethnicity groups and increases lung cancer risk. In the Multiethnic Cohort (MEC), an ethnically diverse prospective cohort (>215,000) established in the early 1990’s in California and Hawaii, we found COPD prevalence was highest in African Americans, followed by European Americans, Native Hawaiians, Latinos and Japanese Americans. Family history and smoking are strong risk factors for COPD with heritability estimates ranging from 20-40%. However, large scale genomic studies (GWAS) have primarily focused on Europeans. Thus, ethnic-specific calibration of polygenic risk scores (PRS) for predicting COPD has the potential to identify those with greatest need for recommended screening and targeted prevention. Methods: Incident COPD case status was identified from …

Association between outdoor air pollution and risk of malignant and benign brain tumors: the Multiethnic Cohort Study

Authors

Anna H Wu,Jun Wu,Chiuchen Tseng,Juan Yang,Salma Shariff-Marco,Scott Fruin,Timothy Larson,Veronica W Setiawan,Shahir Masri,Jacqueline Porcel,Jennifer Jain,Thomas C Chen,Daniel O Stram,Loïc Le Marchand,Beate Ritz,Iona Cheng

Journal

JNCI cancer spectrum

Published Date

2020/4

Background There are increasing concerns about the potential impact of air pollution on chronic brain inflammation and microglia cell activation, but evidence of its carcinogenic effects is limited. Methods We used kriging interpolation and land use regression models to estimate long-term air pollutant exposures of oxides of nitrogen (NOx, NO2), kriging interpolation for ozone (O3), carbon monoxide, and particulate matter (PM2.5, PM10), and nearest monitoring station measurements for benzene for 103 308 men and women from the Multiethnic Cohort, residing largely in Los Angeles County from recruitment (1993–1996) through 2013. We used Cox proportional hazards models to examine the associations between time-varying pollutants and risk of malignant brain cancer (94 men, 116 women) and meningioma (130 men, 425 women) with adjustment for sex, race and …

A case-control study of the joint effect of reproductive factors and radiation treatment for first breast cancer and risk of contralateral breast cancer in the WECARE study

Authors

Jennifer D Brooks,John D Boice Jr,Roy E Shore,Anne S Reiner,Susan A Smith,Leslie Bernstein,Julia A Knight,Charles F Lynch,Esther M John,Kathleen E Malone,Lene Mellemkjaer,Rikke Langballe,Xiaolin Liang,Meghan Woods,Marc Tischkowitz,Patrick Concannon,Daniel O Stram,Jonine L Bernstein

Journal

The Breast

Published Date

2020/12/1

ObjectiveTo examined the impact of reproductive factors on the relationship between radiation treatment (RT) for a first breast cancer and risk of contralateral breast cancer (CBC).MethodsThe Women’s Environmental Cancer and Radiation Epidemiology (WECARE) Study is a multi-center, population-based case-control study where cases are women with asynchronous CBC (N = 1521) and controls are women with unilateral breast cancer (N = 2211). Rate ratios (RR) and 95% confidence intervals (CI) were estimated using conditional logistic regression to assess the independent and joint effects of RT (ever/never and location-specific stray radiation dose to the contralateral breast [0, >0-<1Gy, ≥1Gy]) and reproductive factors (e.g., parity).ResultsNulliparous women treated with RT (≥1Gy dose) were at increased risk of CBC compared with nulliparous women not treated with RT, although this relationship did not …

Factors associated with increased overall and cause-specific mortality in non-alcoholic fatty liver disease in an ethnically diverse cohort in the United States

Authors

Veronica Setiawan,Ju Dong Yang,Songren Wang,Daniel Stram,Mazen Noureddin

Journal

Journal of Hepatology

Published Date

2020/8/1

Conclusion: In a large, prospective, European real-life study of tertiary care outpatient hepatology clinics, 25% of pts are currently referred for known or suspected NAFLD which is confirmed in 77% of cases after multiple diagnostic procedures. 40–62% have advanced fibrosis and 8.4–12% cirrhosis. Diagnostic practices vary widely between countries and pt referral for comorbidities is low. NAFLD is becoming a major burden on hepatology outpatient clinics in Europe

Update on lung cancer screening

Authors

Andrew R Brownlee,Jessica S Donington

Published Date

2020/6

Over the past 10 years, there has been substantial progress in the study and implementation of lung cancer screening using low-dose computed tomography (LDCT). The National Lung Screening Trial, the recently reported NELSON (NEderlands-Leuvens Longkanker Screenings ONderzoek) trial, and other European trials provide strong evidence for the efficacy of LDCT to reduce lung cancer mortality. This has resulted in the United State's Preventative Task Force and numerous professional medical societies adopting lung cancer screening recommendations. Despite the general acceptance of the positive effect of screening, low adoption and implementation rates remain nationally. In this article, the authors discuss the evolution and current state of the evidence for LDCT screening for lung cancer. The authors will also review the associated risks, cost, and challenges of implementation of an LDCT screening …

Abstract C047: Internal smoking dose is associated with specific blood DNA methylation patterns across race/ethnicity: The Multiethnic Cohort Study

Authors

Sungshim L Park,Yesha Patel,Lenora WM Loo,Annette Lum-Jones,Maarit Tiirikainen,Sharon Murphy,Kimberly Siegmund,Daniel O Stram,Loic Le Marchand

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: Lung cancer is the most common cancer in the U.S. and leading cause of cancer-related death. We demonstrated in the Multiethnic Cohort Study that for the same number of cigarettes smoked, Native Hawaiians and African Americans have the highest risk compared to whites, while Japanese Americans and Latinos are at lower risk of disease. We showed that internal smoking dose (as measured by total nicotine equivalents (TNE)) per cigarette differs across race/ethnicity; in part explaining why African Americans have a higher risk of disease and Japanese Americans have a lower risk. DNA methylation of CpG sites from cigarette smoking is one of the most common epigenetic modifications linked to lifestyle. Although many smoking-related DNA methylated CpG sites have been identified, these studies have been primarily conducted in populations of European ancestry. Moreover, the influence of …

Minority-centric meta-analyses of blood lipid levels identify novel loci in the Population Architecture using Genomics and Epidemiology (PAGE) study

Authors

Yao Hu,Mariaelisa Graff,Jeffrey Haessler,Steven Buyske,Stephanie A Bien,Ran Tao,Heather M Highland,Katherine K Nishimura,Niha Zubair,Yingchang Lu,Marie Verbanck,Austin T Hilliard,Derek Klarin,Scott M Damrauer,Yuk-Lam Ho,VA Million Veteran Program,Peter WF Wilson,Kyong-Mi Chang,Philip S Tsao,Kelly Cho,Christopher J O’Donnell,Themistocles L Assimes,Lauren E Petty,Jennifer E Below,Ozan Dikilitas,Daniel J Schaid,Matthew L Kosel,Iftikhar J Kullo,Laura J Rasmussen-Torvik,Gail P Jarvik,Qiping Feng,Wei-Qi Wei,Eric B Larson,Frank D Mentch,Berta Almoguera,Patrick M Sleiman,Laura M Raffield,Adolfo Correa,Lisa W Martin,Martha Daviglus,Tara C Matise,Jose Luis Ambite,Christopher S Carlson,Ron Do,Ruth JF Loos,Lynne R Wilkens,Loic Le Marchand,Chris Haiman,Daniel O Stram,Lucia A Hindorff,Kari E North,Charles Kooperberg,Iona Cheng,Ulrike Peters

Journal

PLoS genetics

Published Date

2020/3/30

Lipid levels are important markers for the development of cardio-metabolic diseases. Although hundreds of associated loci have been identified through genetic association studies, the contribution of genetic factors to variation in lipids is not fully understood, particularly in U.S. minority groups. We performed genome-wide association analyses for four lipid traits in over 45,000 ancestrally diverse participants from the Population Architecture using Genomics and Epidemiology (PAGE) Study, followed by a meta-analysis with several European ancestry studies. We identified nine novel lipid loci, five of which showed evidence of replication in independent studies. Furthermore, we discovered one novel gene in a PrediXcan analysis, minority-specific independent signals at eight previously reported loci, and potential functional variants at two known loci through fine-mapping. Systematic examination of known lipid loci revealed smaller effect estimates in African American and Hispanic ancestry populations than those in Europeans, and better performance of polygenic risk scores based on minority-specific effect estimates. Our findings provide new insight into the genetic architecture of lipid traits and highlight the importance of conducting genetic studies in diverse populations in the era of precision medicine.

Abstract C050: Association between outdoor air pollution and breast cancer survival: The multiethnic cohort study

Authors

Iona Cheng,Juan Yang,Chiuchen Tseng,Jun Wu,Shannon M Conroy,Salma Shariff-Marco,Scarlett Lin Gomez,Alice Whittemore,Daniel O Stram,Loic Le Marchand,Lynne R Wilkens,Beate Ritz,Anna H Wu

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: There are now 3.1 million breast cancer (BC) survivors with 4.5 million survivors projected by 2030. This high and growing burden speaks to the need of identifying modifiable factors that influence BC survival. Particulate matter (PM) air pollutants have been associated with increased mortality for cardiovascular disease (CVD) and several cancers. However, few studies have examined the impact of air pollution on mortality among BC cases. Within the Multiethnic Cohort (MEC), we examined the association between outdoor air pollution and mortality among African American (AA), Latino (LA), Japanese American (JA), and White (WH) women diagnosed with BC. Methods: Kriging interpolation of air pollution data from air monitoring stations was used to estimate PM2.5, PM10, and nitrogen oxides (NOx, NO2) exposures for 3,089 BC cases in the MEC, residing largely in Los Angeles County, linked to …

Radiation Treatment, ATM, BRCA1/2, and CHEK2*1100delC Pathogenic Variants and Risk of Contralateral Breast Cancer

Authors

Anne S Reiner,Mark E Robson,Lene Mellemkjær,Marc Tischkowitz,Esther M John,Charles F Lynch,Jennifer D Brooks,John D Boice,Julia A Knight,Sharon N Teraoka,Xiaolin Liang,Meghan Woods,Ronglai Shen,Roy E Shore,Daniel O Stram,Duncan C Thomas,Kathleen E Malone,Leslie Bernstein,Nadeem Riaz,Wendy Woodward,Simon Powell,David Goldgar,Patrick Concannon,WECARE Study Collaborative Group,Jonine L Bernstein

Journal

JNCI: Journal of the National Cancer Institute

Published Date

2020/12

Whether radiation therapy (RT) affects contralateral breast cancer (CBC) risk in women with pathogenic germline variants in moderate- to high-penetrance breast cancer–associated genes is unknown. In a population-based case-control study, we examined the association between RT; variants in ATM, BRCA1/2, or CHEK2*1100delC; and CBC risk. We analyzed 708 cases of women with CBC and 1399 controls with unilateral breast cancer, all diagnosed with first invasive breast cancer between 1985 and 2000 and aged younger than 55 years at diagnosis and screened for variants in breast cancer–associated genes. Rate ratios (RR) and 95% confidence intervals (CIs) were estimated using multivariable conditional logistic regression. RT did not modify the association between known pathogenic variants and CBC risk (eg, BRCA1/2 pathogenic variant carriers without RT: RR = 3.52, 95% CI = 1.76 to 7.01 …

Genome‐wide association study of liver fat: the multiethnic cohort adiposity phenotype study

Authors

S Lani Park,Yuqing Li,Xin Sheng,Victor Hom,Lucy Xia,Kechen Zhao,Loreall Pooler,V Wendy Setiawan,Unhee Lim,Kristine R Monroe,Lynne R Wilkens,Bruce S Kristal,Johanna W Lampe,Meredith Hullar,John Shepherd,Lenora LM Loo,Thomas Ernst,Adrian A Franke,Maarit Tiirikainen,Christopher A Haiman,Daniel O Stram,Loïc Le Marchand,Iona Cheng

Journal

Hepatology Communications

Published Date

2020/8

The global rise in fatty liver is a major public health problem. Thus, it is critical to identify both global and population‐specific genetic variants associated with liver fat. We conducted a genome‐wide association study (GWAS) of percent liver fat and nonalcoholic fatty liver disease (NAFLD) assessed by magnetic resonance imaging in 1,709 participants from the population‐based Multiethnic Cohort Adiposity Phenotype Study. Our participants comprised older adults of five U.S. racial/ethnic groups: African Americans (n = 277), Japanese Americans (n = 424), Latinos (n = 348), Native Hawaiians (n = 274), and European Americans (n = 386). The established missense risk variant rs738409 located in patatin‐like phospholipase domain containing 3 (PNPLA3) at 22q13 was confirmed to be associated with percent liver fat (P = 3.52 × 10−15) but more strongly in women than men (P heterogeneity = 0.002). Its frequency …

Abstract C052: Association between benzene, a hazardous air pollutant, and lung cancer risk: The Multiethnic Cohort Study

Authors

Iona Cheng,Chiuchen Tseng,Jun Wu,Juan Yang,Salma Shariff-Marco,Jennifer Jain,S Lani Park,Scott Fruin,Timothy Larson,Scarlett Lin Gomez,Lynne Wilkens,Daniel Stram,Loic Le Marchand,Beate Ritz,Anna H Wu

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Background: Benzene is classified as a Group 1 carcinogen in humans. A major pathway of benzene exposure is through inhalation of ambient air contaminated by emissions from motor vehicle exhaust, gas stations, industry, tobacco smoke, and other consumer products. Prior studies of benzene and lung cancer have been limited largely to occupational studies. We examined the association between outdoor air exposure to benzene and lung cancer risk in the large population-based Multiethnic Cohort Study (MEC), including four major U.S. racial/ethnic groups—African Americans, Latinos, Japanese Americans, and Whites. Methods: Ambient benzene exposure was estimated from EPA data from air monitoring stations that were within 20 km of residences of 97,288 MEC participants, largely from Los Angeles County, from the time-period of recruitment (1993-1996) through 12/31/2013. Cox proportional hazards …

Abstract C035: Red meat consumption and pancreatic cancer risk in two prospective studies of racially diverse populations

Authors

Veronica Wendy Setiawan,Songren Wang,Daniel Stram,Lang Wu,Loic Le Marchand,Xiao-ou Shu,Kristine Monroe

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Backgrounds: There are striking racial/ethnic differences in pancreatic cancer incidence in the United States. Studies have reported positive associations between intake of red meat and pancreatic cancer risk; however, less evidence exists for ethnic/racial minorities, including African Americans who have elevated risks of this fatal cancer. In this study, we assessed the association between red meat consumption and pancreatic cancer incidence in two large cohort studies: the Multiethnic Cohort Study (MEC) and the Southern Community Cohort Study (SCCS). Methods: Demographics, dietary data and other risk factors were assessed at cohort enrollment. Total red meat intake was assessed using a quantitative food frequency questionnaire and categorized using cohort-specific quartiles. Incident cases of pancreatic cancer were identified via linkage to state cancer registries and the National Death Index. Cox …

Prognostic Impact of Pre-Transplant Chromosomal Aberrations Detected By SNP-Array in Patients Undergoing Unrelated Donor Hematopoietic Cell Transplant for Acute Myeloid Leukemia

Authors

Youjin Wang,Weiyin Zhou,Lisa J McReynolds,Hormuzd A Katki,Elizabeth A Griffiths,Swapna Thota,Mitchell J Machiela,Meredith Yeager,Philip McCarthy,Marcelo Pasquini,Junke Wang,Ezgi Karaesmen,Abbas Rizvi,Leah Preus,Hancong Tang,Yiwen Wang,Loreall Pooler,Xin Sheng,Christopher A Haiman,David Van Den Berg,Stephen R Spellman,Tao Wang,Michelle Kuxhausen,Stephen J Chanock,Stephanie J Lee,Theresa E Hahn,Lara E Sucheston-Campbell,Shahinaz M Gadalla

Journal

Scientific reports

Published Date

2021/7/22

To improve risk stratification and treatment decisions for patients with acute myeloid leukemia (AML) undergoing hematopoietic cell transplantation (HCT). We used SNP-array data from the DISCOVeRY-BMT study to detect chromosomal aberrations in pre-HCT peripheral blood (collected 2–4 weeks before the administration of conditioning regimen) from 1974 AML patients who received HCT between 2000 and 2011. All aberrations detected in ≥ 10 patients were tested for their association with overall survival (OS), separately by remission status, using the Kaplan–Meier estimator. Cox regression models were used for multivariable analyses. Follow-up was through January 2019. We identified 701 unique chromosomal aberrations in 285 patients (7% of 1438 in complete remission (CR) and 36% of 536 not in CR). Copy-neutral loss-of-heterozygosity (CNLOH) in chr17p in CR patients (3-year OS = 20% vs. 50 …

Exposure measurement error in air pollution studies: the impact of shared, multiplicative measurement error on epidemiological health risk estimates

Authors

Mariam S Girguis,Lianfa Li,Fred Lurmann,Jun Wu,Carrie Breton,Frank Gilliland,Daniel Stram,Rima Habre

Journal

Air Quality, Atmosphere & Health

Published Date

2020/6

Spatiotemporal air pollution models are increasingly being used to estimate health effects in epidemiological studies. Although such exposure prediction models typically result in improved spatial and temporal resolution of air pollution predictions, they remain subject to shared measurement error, a type of measurement error common in spatiotemporal exposure models which occurs when measurement error is not independent of exposures. A fundamental challenge of exposure measurement error in air pollution assessment is the strong correlation and sometimes identical (shared) error of exposure estimates across geographic space and time. When exposure estimates with shared measurement error are used to estimate health risk in epidemiological analyses, complex errors are potentially introduced, resulting in biased epidemiological conclusions. We demonstrate the influence of using a three …

Meta-Analysis of Genome-Wide Association Studies of Acute Myeloid Leukemia (AML) Patients Identifies Variants Associated with Risk of 11q23/KMT2A-Translocated and Core-Binding …

Authors

Thomas PJ Hofer,Nicole M Probst-Hensch,Emmanuelle Bouzigon,Medea Imboden,Marjo-Riitta Jarvelin,Adaikalavan Ramasamy,Alexessander Da Silva Couto Alves,Ivan Curjuric,Joachim Heinrich,Marie Standl,Alexandra Schneider,Regina Hampel,Valerie Siroux,Francine Kauffmann,Florence Demenais,Thierry Rochat,David Strachan,Deborah L Jarvis,Oliver Eickelberg,Melanie Königshoff,Matthias Wjst

Published Date

2012/9/1

Background: The WNT signaling pathway is involved in a wide range of developmental events and maintenance of homeostasis in adult tissue, including lung development and health. WNT signaling genes have also been suggested to play a role in pathogenesis of lung diseases such as chronic obstructive pulmonary disease (COPD) and asthma.Aims and Objectives: The aim of this meta-analysis was to identify consistent disease markers for COPD, asthma, forced expiratory volume in one second (FEV1), and forced vital capacity (FVC) in nine genes of the WNT signaling cascade pathway (WNT10b, WIF1, WISP1, SFRP2, SFRP5, DKK1, Axin2, TCF7L2, and FZD3) using genome-wide association data from six European cohort studies.Methods: The six European cohort studies included are: B58C (UK), ECRHS (multicentre), EGEA (France), GINI / LISA (Germany), NFBC1966 (Finland), and SAPALDIA …

European polygenic risk score for prediction of breast cancer shows similar performance in Asian women

Authors

Weang-Kee Ho,Min-Min Tan,Nasim Mavaddat,Mei-Chee Tai,Shivaani Mariapun,Jingmei Li,Peh-Joo Ho,Joe Dennis,Jonathan P Tyrer,Manjeet K Bolla,Kyriaki Michailidou,Qin Wang,Daehee Kang,Ji-Yeob Choi,Suniza Jamaris,Xiao-Ou Shu,Sook-Yee Yoon,Sue K Park,Sung-Won Kim,Chen-Yang Shen,Jyh-Cherng Yu,Ern Yu Tan,Patrick Mun Yew Chan,Kenneth Muir,Artitaya Lophatananon,Anna H Wu,Daniel O Stram,Keitaro Matsuo,Hidemi Ito,Ching Wan Chan,Joanne Ngeow,Wei Sean Yong,Swee Ho Lim,Geok Hoon Lim,Ava Kwong,Tsun L Chan,Su Ming Tan,Jaime Seah,Esther M John,Allison W Kurian,Woon-Puay Koh,Chiea Chuen Khor,Motoki Iwasaki,Taiki Yamaji,Kiak Mien Veronique Tan,Kiat Tee Benita Tan,John J Spinelli,Kristan J Aronson,Siti Norhidayu Hasan,Kartini Rahmat,Anushya Vijayananthan,Xueling Sim,Paul DP Pharoah,Wei Zheng,Alison M Dunning,Jacques Simard,Rob Martinus van Dam,Cheng-Har Yip,Nur Aishah Mohd Taib,Mikael Hartman,Douglas F Easton,Soo-Hwang Teo,Antonis C Antoniou

Journal

Nature communications

Published Date

2020/7/31

Polygenic risk scores (PRS) have been shown to predict breast cancer risk in European women, but their utility in Asian women is unclear. Here we evaluate the best performing PRSs for European-ancestry women using data from 17,262 breast cancer cases and 17,695 controls of Asian ancestry from 13 case-control studies, and 10,255 Chinese women from a prospective cohort (413 incident breast cancers). Compared to women in the middle quintile of the risk distribution, women in the highest 1% of PRS distribution have a ~2.7-fold risk and women in the lowest 1% of PRS distribution has ~0.4-fold risk of developing breast cancer. There is no evidence of heterogeneity in PRS performance in Chinese, Malay and Indian women. A PRS developed for European-ancestry women is also predictive of breast cancer risk in Asian women and can help in developing risk-stratified screening programmes in Asia.

Abstract C071: Racial/ethnic disparities in weight, weight change in adulthood, and pancreatic cancer incidence: The Multiethnic Cohort

Authors

Albert J Farias,Daniel O Stram,Songren Wang,Stephen J Pandol,Kristine R Monroe,V Wendy Setiawan

Journal

Cancer Epidemiology, Biomarkers & Prevention

Published Date

2020/6/1

Purpose: Japanese Americans, Native Hawaiians and African Americans have a higher incidence of pancreatic cancer compared to non-Hispanic whites that cannot be explained by the rates of obesity or absolute body weight. While absolute body weight in adulthood is positively associated with pancreatic cancer risk, the effect of weight change throughout adulthood, particularly among a racially diverse population, is not well documented for this high-risk group. Methods: This population-based prospective cohort study included 155,308 participants enrolled in the Multiethnic Cohort from 1993-1996 (median follow-up = 20.2 years). We identified 1,328 participants diagnosed with incident primary invasive pancreatic cancer from the linked cohort data with the Hawaii and California SEER registries. Participants diagnosed with other cancers were excluded from the cohort analysis. Body weight at 21 years old and at …

See List of Professors in Daniel O. Stram University(University of Southern California)

Daniel O. Stram FAQs

What is Daniel O. Stram's h-index at University of Southern California?

The h-index of Daniel O. Stram has been 58 since 2020 and 115 in total.

What are Daniel O. Stram's top articles?

The articles with the titles of

Association between Airport Ultrafine Particles and Lung Cancer Risk: The Multiethnic Cohort Study

Excess pancreatic cancer risk due to smoking and modifying effect of quitting smoking: The Multiethnic Cohort Study

Association of Urinary N7-(1-hydroxyl-3-buten-1-yl) Guanine (EB-GII) Adducts and Butadiene-Mercapturic Acids with Lung Cancer Development in Cigarette Smokers

Epigenome-wide association study of total nicotine equivalents in multiethnic current smokers from three prospective cohorts

Novel breast cancer susceptibility loci under linkage peaks identified in African ancestry consortia

Exposure to outdoor ambient air toxics and risk of breast cancer: The multiethnic cohort

Genome-wide association study of abdominal MRI-measured visceral fat: The multiethnic cohort adiposity phenotype study

Excess risk due to smoking and modifying effect of quitting on bladder cancer incidence: the multiethnic cohort

...

are the top articles of Daniel O. Stram at University of Southern California.

What are Daniel O. Stram's research interests?

The research interests of Daniel O. Stram are: Biostatistics, Genetics, Radiation Epidemiology, Clinical Trials

What is Daniel O. Stram's total number of citations?

Daniel O. Stram has 51,354 citations in total.

What are the co-authors of Daniel O. Stram?

The co-authors of Daniel O. Stram are Douglas W Dockery, Nilanjan Chatterjee, Bloomberg Distinguished Professor, Duncan Thomas, Kiros Berhane, Veronica Wendy Setiawan.

    Co-Authors

    H-index: 114
    Douglas W Dockery

    Douglas W Dockery

    Harvard University

    H-index: 104
    Nilanjan Chatterjee, Bloomberg Distinguished Professor

    Nilanjan Chatterjee, Bloomberg Distinguished Professor

    Johns Hopkins University

    H-index: 91
    Duncan Thomas

    Duncan Thomas

    University of Southern California

    H-index: 69
    Kiros Berhane

    Kiros Berhane

    Columbia University in the City of New York

    H-index: 54
    Veronica Wendy Setiawan

    Veronica Wendy Setiawan

    University of Southern California

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