Ping-Chieh Pao

Ping-Chieh Pao

Massachusetts Institute of Technology

H-index: 16

North America-United States

About Ping-Chieh Pao

Ping-Chieh Pao, With an exceptional h-index of 16 and a recent h-index of 14 (since 2020), a distinguished researcher at Massachusetts Institute of Technology, specializes in the field of Neuroscience, Brain aging, DNA damage, Alzheimer’s disease.

His recent articles reflect a diverse array of research interests and contributions to the field:

Multisensory gamma stimulation promotes glymphatic clearance of amyloid

iPSC‐derived microglia carrying the TREM2 R47H/+ mutation are proinflammatory and promote synapse loss

A Cdk5-derived peptide inhibits Cdk5/p25 activity and improves neurodegenerative phenotypes

Histone deacetylases 1 and 2 in memory function

Three decades of Cdk5

Compositions of polyhydroxylated benzophenones and methods of treatment of neurodegenerative disorders

Exifone is a potent HDAC1 activator with neuroprotective activity in human neuronal models of neurodegeneration

Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions

Ping-Chieh Pao Information

University

Massachusetts Institute of Technology

Position

Picower Institute for Learning and Memory

Citations(all)

1951

Citations(since 2020)

1514

Cited By

886

hIndex(all)

16

hIndex(since 2020)

14

i10Index(all)

18

i10Index(since 2020)

18

Email

University Profile Page

Massachusetts Institute of Technology

Ping-Chieh Pao Skills & Research Interests

Neuroscience

Brain aging

DNA damage

Alzheimer’s disease

Top articles of Ping-Chieh Pao

Multisensory gamma stimulation promotes glymphatic clearance of amyloid

Authors

Mitchell H Murdock,Cheng-Yi Yang,Na Sun,Ping-Chieh Pao,Cristina Blanco-Duque,Martin C Kahn,TaeHyun Kim,Nicolas S Lavoie,Matheus B Victor,Md Rezaul Islam,Fabiola Galiana,Noelle Leary,Sidney Wang,Adele Bubnys,Emily Ma,Leyla A Akay,Madison Sneve,Yong Qian,Cuixin Lai,Michelle M McCarthy,Nancy Kopell,Manolis Kellis,Kiryl D Piatkevich,Edward S Boyden,Li-Huei Tsai

Journal

Nature

Published Date

2024/2/28

The glymphatic movement of fluid through the brain removes metabolic waste, , –. Noninvasive 40 Hz stimulation promotes 40 Hz neural activity in multiple brain regions and attenuates pathology in mouse models of Alzheimer’s disease, , –. Here we show that multisensory gamma stimulation promotes the influx of cerebrospinal fluid and the efflux of interstitial fluid in the cortex of the 5XFAD mouse model of Alzheimer’s disease. Influx of cerebrospinal fluid was associated with increased aquaporin-4 polarization along astrocytic endfeet and dilated meningeal lymphatic vessels. Inhibiting glymphatic clearance abolished the removal of amyloid by multisensory 40 Hz stimulation. Using chemogenetic manipulation and a genetically encoded sensor for neuropeptide signalling, we found that vasoactive intestinal peptide interneurons facilitate glymphatic clearance by regulating arterial pulsatility. Our findings …

iPSC‐derived microglia carrying the TREM2 R47H/+ mutation are proinflammatory and promote synapse loss

Authors

Jay Penney,William T Ralvenius,Anjanet Loon,Oyku Cerit,Vishnu Dileep,Blerta Milo,Ping‐Chieh Pao,Hannah Woolf,Li‐Huei Tsai

Journal

Glia

Published Date

2024/2

Genetic findings have highlighted key roles for microglia in the pathology of neurodegenerative conditions such as Alzheimer's disease (AD). A number of mutations in the microglial protein triggering receptor expressed on myeloid cells 2 (TREM2) have been associated with increased risk for developing AD, most notably the R47H/+ substitution. We employed gene editing and stem cell models to gain insight into the effects of the TREM2 R47H/+ mutation on human‐induced pluripotent stem cell‐derived microglia. We found transcriptional changes affecting numerous cellular processes, with R47H/+ cells exhibiting a proinflammatory gene expression signature. TREM2 R47H/+ also caused impairments in microglial movement and the uptake of multiple substrates, as well as rendering microglia hyperresponsive to inflammatory stimuli. We developed an in vitro laser‐induced injury model in neuron–microglia …

A Cdk5-derived peptide inhibits Cdk5/p25 activity and improves neurodegenerative phenotypes

Authors

Ping-Chieh Pao,Jinsoo Seo,Audrey Lee,Oleg Kritskiy,Debasis Patnaik,Jay Penney,Ravikiran M Raju,Ute Geigenmuller,M Catarina Silva,Diane E Lucente,James F Gusella,Bradford C Dickerson,Anjanet Loon,Margaret X Yu,Michael Bula,Melody Yu,Stephen J Haggarty,Li-Huei Tsai

Journal

Proceedings of the National Academy of Sciences

Published Date

2023/4/18

Aberrant activity of cyclin-dependent kinase (Cdk5) has been implicated in various neurodegenerative diseases. This deleterious effect is mediated by pathological cleavage of the Cdk5 activator p35 into the truncated product p25, leading to prolonged Cdk5 activation and altered substrate specificity. Elevated p25 levels have been reported in humans and rodents with neurodegeneration, and the benefit of genetically blocking p25 production has been demonstrated previously in rodent and human neurodegenerative models. Here, we report a 12-amino-acid-long peptide fragment derived from Cdk5 (Cdk5i) that is considerably smaller than existing peptide inhibitors of Cdk5 (P5 and CIP) but shows high binding affinity toward the Cdk5/p25 complex, disrupts the interaction of Cdk5 with p25, and lowers Cdk5/p25 kinase activity. When tagged with a fluorophore (FITC) and the cell-penetrating transactivator of …

Histone deacetylases 1 and 2 in memory function

Authors

Ping-Chieh Pao,Li-Huei Tsai

Published Date

2022/3/9

Histone deacetylases (HDACs) have been implicated in learning and memory, and their dysregulation has been linked to cognitive impairment in brain aging and neurodegenerative diseases. In this review, we focus on HDAC1 and HDAC2, highlighting recent progress on their roles in regulating brain function through distinct mechanisms, including gene repression and DNA repair pathways. Moreover, we discuss evidence demonstrating how HDAC1 and HDAC2 could be modulated and their potential as targets to combat memory deficits.

Three decades of Cdk5

Authors

Ping-Chieh Pao,Li-Huei Tsai

Published Date

2021/11/23

Cdk5 is a proline-directed serine/threonine protein kinase that governs a variety of cellular processes in neurons, the dysregulation of which compromises normal brain function. The mechanisms underlying the modulation of Cdk5, its modes of action, and its effects on the nervous system have been a great focus in the field for nearly three decades. In this review, we provide an overview of the discovery and regulation of Cdk5, highlighting recent findings revealing its role in neuronal/synaptic functions, circadian clocks, DNA damage, cell cycle reentry, mitochondrial dysfunction, as well as its non-neuronal functions under physiological and pathological conditions. Moreover, we discuss evidence underscoring aberrant Cdk5 activity as a common theme observed in many neurodegenerative diseases.

Compositions of polyhydroxylated benzophenones and methods of treatment of neurodegenerative disorders

Published Date

2021/11/23

The present invention relates to polyhydroxylated benzo phenone compounds useful in the treatment of neurodegen erative, neurological, psychiatric, and cognitive diseases, in particular those associated with a deficiency in HDAC1 deacetylase activity.

Exifone is a potent HDAC1 activator with neuroprotective activity in human neuronal models of neurodegeneration

Authors

Debasis Patnaik,Ping-Chieh Pao,Wen-Ning Zhao,M Catarina Silva,Norma K Hylton,Peter S Chindavong,Ling Pan,Li-Huei Tsai,Stephen J Haggarty

Journal

ACS chemical neuroscience

Published Date

2021/1/8

Genomic instability caused by a deficiency in the DNA damage response and repair has been linked to age-related cognitive decline and neurodegenerative diseases. Preventing genomic instability that ultimately leads to neuronal death may provide a broadly effective strategy to protect against multiple potential genotoxic stressors. Recently, the zinc-dependent class I histone deacetylase (HDAC1) has been identified as a critical factor for protecting neurons from deleterious effects of DNA damage in Alzheimer’s disease (AD), amyotrophic lateral sclerosis (ALS), and frontotemporal dementia (FTD). Translating these observations to a novel neuroprotective therapy for AD, ALS, and FTD may be advanced by the identification of small molecules capable of increasing the deacetylase activity of HDAC1 selectively over other structurally similar HDACs. Here, we demonstrate that exifone, a drug previously shown to be …

Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions

Authors

Solveig K Sieberts,Thanneer M Perumal,Minerva M Carrasquillo,Mariet Allen,Joseph S Reddy,Gabriel E Hoffman,Kristen K Dang,John Calley,Philip J Ebert,James Eddy,Xue Wang,Anna K Greenwood,Sara Mostafavi,Larsson Omberg,Mette A Peters,Benjamin A Logsdon,Philip L De Jager,Nilüfer Ertekin-Taner,Lara M Mangravite

Journal

Scientific data

Published Date

2020/10/12

The availability of high-quality RNA-sequencing and genotyping data of post-mortem brain collections from consortia such as CommonMind Consortium (CMC) and the Accelerating Medicines Partnership for Alzheimer’s Disease (AMP-AD) Consortium enable the generation of a large-scale brain cis-eQTL meta-analysis. Here we generate cerebral cortical eQTL from 1433 samples available from four cohorts (identifying >4.1 million significant eQTL for >18,000 genes), as well as cerebellar eQTL from 261 samples (identifying 874,836 significant eQTL for >10,000 genes). We find substantially improved power in the meta-analysis over individual cohort analyses, particularly in comparison to the Genotype-Tissue Expression (GTEx) Project eQTL. Additionally, we observed differences in eQTL patterns between cerebral and cerebellar brain regions. We provide these brain eQTL as a resource for use by the research …

Meta-analysis of the Alzheimer’s disease human brain transcriptome and functional dissection in mouse models

Authors

Ying-Wooi Wan,Rami Al-Ouran,Carl G Mangleburg,Thanneer M Perumal,Tom V Lee,Katherine Allison,Vivek Swarup,Cory C Funk,Chris Gaiteri,Mariet Allen,Minghui Wang,Sarah M Neuner,Catherine C Kaczorowski,Vivek M Philip,Gareth R Howell,Heidi Martini-Stoica,Hui Zheng,Hongkang Mei,Xiaoyan Zhong,Jungwoo Wren Kim,Valina L Dawson,Ted M Dawson,Ping-Chieh Pao,Li-Huei Tsai,Jean-Vianney Haure-Mirande,Michelle E Ehrlich,Paramita Chakrabarty,Yona Levites,Xue Wang,Eric B Dammer,Gyan Srivastava,Sumit Mukherjee,Solveig K Sieberts,Larsson Omberg,Kristen D Dang,James A Eddy,Phil Snyder,Yooree Chae,Sandeep Amberkar,Wenbin Wei,Winston Hide,Christoph Preuss,Ayla Ergun,Phillip J Ebert,David C Airey,Sara Mostafavi,Lei Yu,Hans-Ulrich Klein,Gregory W Carter,David A Collier,Todd E Golde,Allan I Levey,David A Bennett,Karol Estrada,T Matthew Townsend,Bin Zhang,Eric Schadt,Philip L De Jager,Nathan D Price,Nilüfer Ertekin-Taner,Zhandong Liu,Joshua M Shulman,Lara M Mangravite,Benjamin A Logsdon

Journal

Cell reports

Published Date

2020/7/14

We present a consensus atlas of the human brain transcriptome in Alzheimer's disease (AD), based on meta-analysis of differential gene expression in 2,114 postmortem samples. We discover 30 brain coexpression modules from seven regions as the major source of AD transcriptional perturbations. We next examine overlap with 251 brain differentially expressed gene sets from mouse models of AD and other neurodegenerative disorders. Human-mouse overlaps highlight responses to amyloid versus tau pathology and reveal age- and sex-dependent expression signatures for disease progression. Human coexpression modules enriched for neuronal and/or microglial genes broadly overlap with mouse models of AD, Huntington's disease, amyotrophic lateral sclerosis, and aging. Other human coexpression modules, including those implicated in proteostasis, are not activated in AD models but rather following …

HDAC1 modulates OGG1-initiated oxidative DNA damage repair in the aging brain and Alzheimer’s disease

Authors

Ping-Chieh Pao,Debasis Patnaik,L Ashley Watson,Fan Gao,Ling Pan,Jun Wang,Chinnakkaruppan Adaikkan,Jay Penney,Hugh P Cam,Wen-Chin Huang,Lorena Pantano,Audrey Lee,Alexi Nott,Trongha X Phan,Elizabeta Gjoneska,Sara Elmsaouri,Stephen J Haggarty,Li-Huei Tsai

Journal

Nature communications

Published Date

2020/5/18

DNA damage contributes to brain aging and neurodegenerative diseases. However, the factors stimulating DNA repair to stave off functional decline remain obscure. We show that HDAC1 modulates OGG1-initated 8-oxoguanine (8-oxoG) repair in the brain. HDAC1-deficient mice display age-associated DNA damage accumulation and cognitive impairment. HDAC1 stimulates OGG1, a DNA glycosylase known to remove 8-oxoG lesions that are associated with transcriptional repression. HDAC1 deficiency causes impaired OGG1 activity, 8-oxoG accumulation at the promoters of genes critical for brain function, and transcriptional repression. Moreover, we observe elevated 8-oxoG along with reduced HDAC1 activity and downregulation of a similar gene set in the 5XFAD mouse model of Alzheimer’s disease. Notably, pharmacological activation of HDAC1 alleviates the deleterious effects of 8-oxoG in aged wild-type …

Exposure to phthalates impaired neurodevelopment through estrogenic effects and induced DNA damage in neurons

Authors

Shisan Xu,Huan Zhang,Ping-Chieh Pao,Audrey Lee,Jun Wang,Yu Suen Chan,Francis AM Manno III,Shun Wan Chan,Shuk Han Cheng,Xueping Chen

Journal

Aquatic toxicology

Published Date

2020/5/1

Phthalates are commonly used in plastic products in daily life. The endocrine-disrupting effects of phthalates have been widely reported. Accumulating evidence from human cohorts and lab animals indicate exposure to phthalates might impair neurodevelopment. However, the direct causal relationship and mechanism between phthalates with neurodevelopment and neurotoxicity have not been firmly established. We found that phthalates (i.e. DBP, DINP, BBP) disrupted the expression of estrogen receptors (esr1, esr2a, esr2b), and impaired neurogenesis in the brain of zebrafish during embryonic development. Moreover, the abnormal expression of estrogen receptors, especially esr2a, was partly rescued in zebrafish which exposed to phthalates, with the estrogen receptor antagonist tamoxifen. Hence, impaired neurogenesis of zebrafish exposed to phthalates was partly reversed by tamoxifen treatment. Moreover …

Phosphoproteomics identifies microglial Siglec‐F inflammatory response during neurodegeneration

Authors

Nader Morshed,William T Ralvenius,Alexi Nott,L Ashley Watson,Felicia H Rodriguez,Leyla A Akay,Brian A Joughin,Ping‐Chieh Pao,Jay Penney,Lauren LaRocque,Diego Mastroeni,Li‐Huei Tsai,Forest M White

Journal

Molecular Systems Biology

Published Date

2020/12

Alzheimer’s disease (AD) is characterized by the appearance of amyloid‐β plaques, neurofibrillary tangles, and inflammation in brain regions involved in memory. Using mass spectrometry, we have quantified the phosphoproteome of the CK‐p25, 5XFAD, and Tau P301S mouse models of neurodegeneration. We identified a shared response involving Siglec‐F which was upregulated on a subset of reactive microglia. The human paralog Siglec‐8 was also upregulated on microglia in AD. Siglec‐F and Siglec‐8 were upregulated following microglial activation with interferon gamma (IFNγ) in BV‐2 cell line and human stem cell‐derived microglia models. Siglec‐F overexpression activates an endocytic and pyroptotic inflammatory response in BV‐2 cells, dependent on its sialic acid substrates and immunoreceptor tyrosine‐based inhibition motif (ITIM) phosphorylation sites. Related human Siglecs induced a similar …

See List of Professors in Ping-Chieh Pao University(Massachusetts Institute of Technology)

Ping-Chieh Pao FAQs

What is Ping-Chieh Pao's h-index at Massachusetts Institute of Technology?

The h-index of Ping-Chieh Pao has been 14 since 2020 and 16 in total.

What are Ping-Chieh Pao's top articles?

The articles with the titles of

Multisensory gamma stimulation promotes glymphatic clearance of amyloid

iPSC‐derived microglia carrying the TREM2 R47H/+ mutation are proinflammatory and promote synapse loss

A Cdk5-derived peptide inhibits Cdk5/p25 activity and improves neurodegenerative phenotypes

Histone deacetylases 1 and 2 in memory function

Three decades of Cdk5

Compositions of polyhydroxylated benzophenones and methods of treatment of neurodegenerative disorders

Exifone is a potent HDAC1 activator with neuroprotective activity in human neuronal models of neurodegeneration

Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions

...

are the top articles of Ping-Chieh Pao at Massachusetts Institute of Technology.

What are Ping-Chieh Pao's research interests?

The research interests of Ping-Chieh Pao are: Neuroscience, Brain aging, DNA damage, Alzheimer’s disease

What is Ping-Chieh Pao's total number of citations?

Ping-Chieh Pao has 1,951 citations in total.

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